Bacteroides caccae: CGC64_10040
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Entry
CGC64_10040 CDS
T05064
Name
(GenBank) ATP-dependent endonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bcac
Bacteroides caccae
Brite
KEGG Orthology (KO) [BR:
bcac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcac03400
]
CGC64_10040
DNA repair and recombination proteins [BR:
bcac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CGC64_10040
Archaeal homologous recombinant proteins
CGC64_10040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
AAA_21
ABC_tran
AAA_22
MMR_HSR1
AAA_16
DUF87
AAA_25
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ASM66252
UniProt:
A0A413MQX5
LinkDB
All DBs
Position
2558378..2561242
Genome browser
AA seq
954 aa
AA seq
DB search
MKILAIRLKNLTSIEGAVEVDFAMEPLNSAGIFAISGATGAGKSTLLDALCLALYDKAPR
FANSVESINLADVGDNQINQSDVRNLLRRGTTDGYAEVDFLGVDGHRYRSRWSVRRTRNK
VSGSLQPQTMEVKELDTGKEFQGTKKELLAQLTELVGLTYEQFTRTVLLAQNDFSTFLKS
KGVAKAELLEKLTGTGVYSRISQEVFLRNKLVQEEVTTIRNRMSVIDLLPEEELLALQKE
KELLIAKRAVGIQLLAEQNARLNIVRSLKMQEELWKKKQQEEQGEEAKLRLLQETLASQE
EGLVRFKAQWEAIQPDLKKARQLDVQIQSQQEGYNQLRQILETACGQVAEQEEKMRMATK
QLQGAYRSLNRLLTNTETESLPLEQVEDILQQEEDKLKAAIKANEERLVRLNAFDYVSLD
EEQKKLQKELVRQQNVRQLTESQEKVKTEIVRLEKETVDCSTQLTEQEATRKTIQRLYEN
ARMAVGKDVKALRQQLQEGEACPVCGSTSHPYHREQEVVDILFRNIEQEYNTVVIACQQT
NNQHIALQRDLAHQKTVAGQIKEQLSIWQKEEIHAGNEEQIQNRLQELAKRIQEYSSLYT
EWQQNDETIKKIRVHSEALRENVSQCRLTMQQVSSAKEQLALLQNAASAEQKRFEVVEKA
LDTLRQERSQLLKGKSADEAEAAVAKREKELTHALDGARLGVETSHNRLLGLQGEMKQIA
ATVGELQEQQKKIESPEQLPEIIKQQQEDNLNTERSLSAIEVRLLQQAKNKVTAELIAKE
LAEKQLIAERWAKLNKLIGSADGAKFKVIAQSYTLNLLLLHANKHLSYLSKRYKLQQVPG
TLALQVIDCDMCDEIRTVYSLSGGESFLISLALALGLSSLSSNNLKVESLFIDEGFGSLD
ADSLRTAMEALEQLQMQGRKIGVISHVQEMSERISVQVQVHKKVNGKSVLTVVG
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgaagatattagcgatacgattgaaaaatcttacttcgatagaaggagcggtagaagtt
gattttgcaatggagccgttgaactcggcaggaatatttgcgatttcaggtgctacggga
gctggcaaatctactttattagatgcattgtgtctggcattgtatgataaagcacctcgt
tttgcaaattcggtagaaagtataaatttggcggatgtaggagataatcagattaatcag
tcggatgtaaggaatctgcttcgtcgtggtacgaccgacggatatgcagaggttgatttc
ttaggagtcgatggtcatagataccgttctcgctggtcggtgagacggacaagaaataag
gtgagcggttccttgcaaccacaaacgatggaagtgaaagagctggatacagggaaagag
tttcaaggaaccaaaaaggaactgctggctcaactgacagaattggtgggtttgacgtat
gagcagtttacccggactgtcttattggctcaaaatgatttttctacattcttgaaatcg
aagggagtcgcaaaagccgaactgcttgaaaaattgacgggaaccggtgtttattcccgt
atttctcaggaagtttttttacgaaacaagttggtacaggaagaagtgactacgattcga
aatagaatgagtgtaatcgacctcttgccggaggaagaacttcttgctttacagaaagaa
aaagaattgctgattgcgaaacgtgcagtggggattcaattactggcggaacagaatgcc
cggttgaacattgtccgttcgttaaagatgcaggaggaactttggaaaaagaagcaacag
gaagaacaaggcgaagaggcaaagttgagactcctgcaggaaacactggcttcacaggaa
gaagggttggtacgttttaaagcacaatgggaagctatacaaccggatttgaagaaagcc
cgtcagttggatgtgcagatacagtctcaacaggaaggctataatcagttgcggcagata
ttggaaacagcttgcgggcaggtggcggagcaggaagagaagatgcggatggcaacgaaa
cagttgcagggggcttatcgttcattaaaccgtttgttgacgaatacggaaacggagtcg
ttgccgcttgaacaagtagaggatattctacagcaggaagaagataaactgaaagccgcc
ataaaagccaatgaggaacgactggtccggctaaatgcttttgattatgtatcattagac
gaagaacagaagaaactacaaaaagaactggttcgtcaacagaatgtccggcagttgact
gagtcgcaggagaaagtgaaaacagaaatagtaagactggagaaagaaacggttgattgt
tcgacgcagttaacagaacaggaagcgacacgaaaaacgattcagcgtctttatgaaaat
gcccgtatggcagtgggaaaagacgtgaaagcattgcgtcaacagttacaggaaggagaa
gcttgtccggtttgcggcagtacgtcacatccttatcaccgggaacaggaagtagtggat
attcttttccgaaatatagagcaggagtataatacggtggtgattgcctgtcagcaaaca
aataatcagcatatagccctgcaacgtgatctggcgcatcaaaaaactgttgccggacag
atcaaagaacagttatcaatatggcagaaagaagaaattcatgcaggaaacgaagaacag
atacagaaccgtttacaggaattggcaaaacgtattcaggagtatagtagtctctatacg
gagtggcaacaaaatgatgagacgataaagaagatacgtgtccatagtgaggctttgcgt
gaaaatgtttcccaatgtcgtttgactatgcagcaagtttcgtccgctaaagaacagttg
gcactattacaaaacgctgcttctgccgaacagaaacgctttgaagtagtagagaaagcg
ttggatacacttcgtcaggaacggtcgcaattattaaaaggaaagagtgcggatgaagcg
gaagccgctgtagccaaaagggaaaaagagctgactcatgctttagacggggctcggttg
ggagtagaaacttcgcacaaccgtcttttaggtttacaaggggaaatgaaacagattgcc
gcaactgtcggggaattgcaggagcaacagaaaaagattgaatctcccgaacaacttccc
gaaataataaagcaacagcaggaagacaatctaaatacggaacgtagcctttctgctatc
gaagtccgcctgttgcaacaggcaaaaaataaagtaacagccgaactgatagctaaagag
ctggccgaaaagcaattgattgccgaacgttgggctaaactgaacaagttgatcggtagt
gccgacggagcaaagttcaaagttatagcacaaagctatacattgaatttattgttactt
catgccaacaagcatttgtcttatctatccaaacgctataaattgcagcaagtacccggc
actttggcgcttcaggtgattgattgtgatatgtgtgatgaaatacggactgtatattct
ctttccggaggagagtcgtttctgatatctttggcattggcactgggactgtcctcgctg
tcgagcaacaacctgaaagtagaatctctttttattgacgagggattcggctctttggat
gccgatagcttgcggacagctatggaagcgttggaacaattacagatgcaaggaaggaaa
ataggagtaatttctcatgtacaggaaatgagtgaacggatctccgtccaggtgcaggtg
cataagaaagtcaatggaaagagcgtgcttaccgtcgtagggtaa
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