Bacteroides caccae: CGC64_11835
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Entry
CGC64_11835 CDS
T05064
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
bcac
Bacteroides caccae
Pathway
bcac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bcac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CGC64_11835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcac03400
]
CGC64_11835
DNA repair and recombination proteins [BR:
bcac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGC64_11835
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CGC64_11835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
EAD4
HIND
Motif
Other DBs
NCBI-ProteinID:
ASM66578
UniProt:
A0A413IVS5
LinkDB
All DBs
Position
complement(2927476..2929509)
Genome browser
AA seq
677 aa
AA seq
DB search
MNFELTSAYKPTGDQPEAIAQLTDGVIQGLPAQTLLGVTGSGKTFTIANVIANINKPTLI
LSHNKTLAAQLYSEFKGFFPNNAVEYYVSYYDYYQPEAYLPNSDTYIEKDLAINDEIDKL
RLAATSALLSGRKDVVVVSSVSCIYGMGNPSDFYKNVIEIERGRMLDRNVFLRRLVDSLY
VRNDIDLNRGNFRVKGDTVDIYLAYTDNLLRVTFWGDEIDGIEEVDPVTGVTIAPFEAYK
IYPANLFMTTKEATLRAIHEIEDDLTKQVAFFESIGKEYEAKRLYERVTYDMEMIRELGH
CSGIENYSRYFDGRAAGTRPYCLLDFFPDDFLIVIDESHVSVPQIRAMYGGDRARKINLV
EYGFRLPAAMDNRPLKFEEFAEMAKQVIYVSATPAEYELIQSEGIVVEQVIRPTGLLDPI
IEVRPSLNQIDDLMEEIQLRIEKSERVLVTTLTKRMAEELTEYLLNNNVRCNYIHSDVDT
LERVKIMDDLRQGIYDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRSHRSLTQTAGRA
ARNVNGKVIMYADRMTDSMKLTIDETNRRREKQLAYNEANGITPQQIKKARNLSVFGNAN
SETEELLKEKHAYVEPSTPNIAADPVVQYMSKAQMEKSIERTRKLMQEAAKKLEFIEAAQ
YRDELLKLEDLMKEKWG
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgaattaacatcagcctacaaacccaccggagaccaaccggaagcgattgcc
caactaacagacggagtaatccagggacttcctgcacagactttattaggagttaccggt
tcgggaaagacattcactatcgccaacgttattgctaacatcaacaagccgacgttgatt
ctaagccataacaagacgctggctgcacagttatacagcgagtttaagggattttttccg
aataatgcggtagaatactatgtttcttactatgactattatcagccggaggcctatcta
cccaacagtgatacttatatagaaaaagaccttgctatcaatgacgaaattgacaaactc
cgtcttgctgccacttctgccctactctccggacgaaaggatgtggtcgtggtgtcttcc
gtttcttgtatctatggcatgggaaatccttcggacttctataaaaatgtcatagaaatc
gaacggggacgtatgctcgaccgcaacgtattcctccgccggctagtagatagtttatat
gtacgcaacgacattgacctaaaccgtgggaatttccgtgtcaagggagatacagtagat
atttatctggcctatacggacaatctgctccgtgtcactttctggggtgacgaaattgac
ggtatagaagaggtagacccagtgaccggagtcaccattgctcctttcgaagcttacaag
atttatccggcaaatctgttcatgactaccaaggaggcgactctccgtgccattcatgaa
atagaagatgatctgaccaaacaggttgccttctttgaatcaatcggcaaagaatacgag
gccaaacggctctatgaacgggttacttatgatatggaaatgatccgggagttgggacac
tgctccgggatagagaactattcacgttacttcgacggtcgggctgccggtactcgtcca
tactgcctgctcgatttcttcccggacgatttcttgattgttattgacgaaagccatgtt
agcgtaccacaaatccgtgccatgtacggaggagaccgtgcccgtaaaatcaatcttgta
gaatatggcttccgtttgcccgcagccatggacaaccgtccgttaaaatttgaagagttt
gcagaaatggcaaagcaggtgatctatgtcagtgccactccggcagaatatgaattgatt
cagtctgaaggtattgtcgtagaacaagtgattcgtcccaccggcctgcttgatcctatc
attgaagtccggccgagcctgaatcaaattgatgatttaatggaagaaatccagcttcgt
atcgaaaaaagcgaacgtgtgcttgtcactactctcaccaaacgtatggctgaagaactg
accgaatatctccttaataataatgtaagatgcaattatatccacagtgatgtcgacact
ttggagcgtgtgaagattatggatgatctccggcaaggtatatacgatgtactgattggt
gtcaacctgcttcgtgaggggcttgaccttccagaagtatcacttgttgctatccttgat
gcggataaggaaggattcctccgttcacaccgttccctgacacagaccgccggacgtgct
gcccgtaatgtcaatggaaaagttatcatgtatgccgacagaatgacggacagtatgaaa
ctcaccattgacgagactaaccgccgccgcgaaaaacagttggcttacaatgaagcaaac
ggaatcactccccaacagattaaaaaggctcgaaatctatcagtattcggaaatgcaaac
tcggaaacagaagaactgctgaaagaaaagcacgcttatgttgaaccttctactccgaat
attgcagcagatccggtggtacagtatatgagcaaagcgcaaatggaaaagagcatcgaa
cgtacccgcaaactaatgcaagaggcagccaagaaactggaatttatcgaagctgcacaa
tatcgcgatgaattattgaaactggaagaccttatgaaggagaaatggggataa
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integrated database retrieval system
