Bacteroides caccae: CGC64_12300
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Entry
CGC64_12300 CDS
T05064
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bcac
Bacteroides caccae
Pathway
bcac03420
Nucleotide excision repair
bcac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CGC64_12300
03430 Mismatch repair
CGC64_12300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcac03400
]
CGC64_12300
Enzymes [BR:
bcac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGC64_12300
DNA repair and recombination proteins [BR:
bcac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGC64_12300
MMR (mismatch excision repair)
Other MMR factors
CGC64_12300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_12
ResIII
DUF7376
PhoH
DUF507
Motif
Other DBs
NCBI-ProteinID:
ASM66662
LinkDB
All DBs
Position
3035947..3038400
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AA seq
817 aa
AA seq
DB search
MNTNYIEELNESQCAAVTYNDGPSLVIAGAGSGKTRVLTYKIAYLLENGYNPWNILALTF
TNKAAREMKERIARQVGMERARYLWMGTFHSIFSRILRAEASYIGFTSKFTIYDTADSKS
LLITIIDEVLKEKVHEDLLRKYGNRPDLEEKEKAKVIELKKIYKPGVVQARISNAKNHLV
TPTGYAANKEAYEGDMAAKMPAIRDIYTRYWERCRWAGAMDFDDLLVYTYILFRDFPDVL
ARYRDQFRYVLVDEYQDTNYAQHSIVLQLTKENQRVCVVGDDAQSIYSFRGADIDNILYF
TKIYPDTKVFKLEQNYRSTQTIVCAANSLIEKNERQIRKAVFSEKEKGEPIGVFQAYSDV
EEGDIVANKIAELRREFRYGYAEFAILYRTNAQSRVFEEALRKRSMPYKIYGGLSFYQRK
EIKDVIAYFRLVVNPNDEEAFKRIINYPARGIGDTTVGKIISAATDNGVSLWAALCEPLS
YGLNINKGTHAKLQGFRELIEGFITGQADKNAYEIGTDIIRRSGIINDVCQDTSPENLSR
KENIEELVNGMNDFCALRQEEGNPNISLTDFLSEIALLTDQDSDKADDGEKITLMTVHSA
KGLEFKNVFVVGLEENLFPSGMAGDSPRALEEERRLFYVAITRAEEHCYLSFAKTRFRYG
KMEFGSPSRFLRDIDVHYLQLPHEAGVSRSVDEGAGRFRREIEGGFTRSASPSRASFGSS
SSEQRARSKAQIIAPSVPRNLKKVSAVSGSSSAQSAASNAASVTGVRAGQMIEHERFGLG
EVMKVEGTGDNAKATIHFKNAGDKQLLLRFARFKVIK
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaataccaattatatagaggagttgaatgagagtcagtgtgctgcagtgacttataac
gacggaccttcgctggtaatagccggtgccggttcgggaaagacgcgcgtattgacttat
aaaattgcctatttgcttgagaacggttacaacccgtggaacatccttgcactgaccttt
accaataaggcggcgcgtgagatgaaggagcgtattgcccgtcaggtaggtatggagcgg
gcacgttatttgtggatgggcactttccattccattttctcccgtatccttcgtgccgaa
gcatcatatatcggatttacttccaaatttactatttatgatacagcagatagcaaaagt
ctgcttattacaatcatagacgaagtgttaaaagaaaaagttcatgaggatttgttacgt
aaatatggtaatcgacctgatttggaggagaaagaaaaggcgaaagtcatcgaattgaag
aaaatctataagccgggagtcgtacaggcacgtatttccaatgccaaaaatcatctggtc
actcctacggggtatgccgctaacaaagaggcttatgaaggcgatatggccgctaaaatg
cctgctatccgtgatatttatacccgttactgggagagatgccgctgggccggggcaatg
gacttcgatgatttgctggtgtatacttatatcctgttccgtgatttcccggatgtgctg
gcgcgttatcgtgatcagttccgttatgtgttggtggacgagtatcaagatacgaactat
gcgcagcacagcattgtcctgcaactgacgaaggaaaaccagcgtgtctgcgtggtaggg
gatgatgcacagagtatctactccttccggggtgcggatattgataacatcctttatttt
acaaaaatctatccggatacgaaagtcttcaagttggaacagaattatcgctctacgcaa
acgatcgtctgtgctgccaacagtctgattgagaagaatgaacgtcagatacggaaagcc
gtattctcggagaaagaaaagggagagcctattggggtatttcaagcttacagtgatgtg
gaagaaggggatattgtggcgaacaaaatagcagaattgcgccgggagtttcgttacgga
tatgccgaatttgctatcttatatcgaacgaatgcgcagagccgtgtttttgaggaagca
cttcggaaacgaagtatgccctataagatatatggaggactctcgttttaccagcgtaag
gagataaaggatgtgattgcttacttccggttggtggtgaatccgaatgatgaagaagcg
ttcaaacgtatcattaattatcctgcccgtggtatcggggatactactgtcggaaagatt
atatcggcggctaccgataatggcgtcagcctttgggcggcactttgtgaaccattgagt
tatgggctcaatatcaataaagggacgcatgcgaaattgcaaggtttccgtgaactgatt
gagggttttattaccggtcaggcggataagaatgcatacgaaataggaacagatattatc
cgtcggtccggtatcatcaatgatgtctgtcaggatacgtcgcctgaaaacttgagcagg
aaagaaaatatcgaggagttggtgaacgggatgaatgacttttgtgctttgcggcaggaa
gaaggtaacccgaacatttccctgaccgattttctttcggagattgccttgcttaccgat
caggactctgataaagcggatgacggggaaaagataaccttgatgaccgtgcattcggct
aaaggactggaatttaagaacgtatttgtggtcgggctggaagaaaatctctttcccagt
ggaatggcaggagattctcctcgtgcattggaagaagaacgccgtttgttctatgtggcg
atcacccgtgcggaagaacattgctatctttcgtttgcaaagacccgttttcgttacgga
aaaatggaatttggaagtcccagccgcttcttgcgtgatattgatgttcattatttgcaa
ttaccgcatgaggcaggagtgagtcgttcggttgatgaaggcgcagggcgtttccgtagg
gagattgagggaggcttcactcgttccgcttctccgtcgcgtgcttctttcggtagtagt
tcttccgaacagcgtgcacgttcgaaagcacagattatagcccccagtgtgccgagaaac
ctgaaaaaagtgagtgcggtgagtggaagcagtagtgcacagtcggcagcttcgaatgct
gcgtcggtgacgggagtacgtgccggacagatgatagagcacgaacgtttcggactgggt
gaagtgatgaaagtggaaggaacgggagataatgcgaaagcaaccattcatttcaaaaat
gcgggtgacaaacaactattattgcgttttgcccgttttaaagtgataaaataa
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