Bacteroides caccae: CGC64_13700
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Entry
CGC64_13700 CDS
T05064
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bcac
Bacteroides caccae
Pathway
bcac03030
DNA replication
bcac03430
Mismatch repair
bcac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC64_13700 (holA)
03430 Mismatch repair
CGC64_13700 (holA)
03440 Homologous recombination
CGC64_13700 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcac03032
]
CGC64_13700 (holA)
03400 DNA repair and recombination proteins [BR:
bcac03400
]
CGC64_13700 (holA)
Enzymes [BR:
bcac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC64_13700 (holA)
DNA replication proteins [BR:
bcac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGC64_13700 (holA)
DNA repair and recombination proteins [BR:
bcac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGC64_13700 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
POTRA_1
PTA_PTB
HTH_57
Motif
Other DBs
NCBI-ProteinID:
ASM66902
UniProt:
A0A174URN5
LinkDB
All DBs
Position
3334896..3335915
Genome browser
AA seq
339 aa
AA seq
DB search
MAKQELTCDDILKELKAKQYRPIYYLMGEESYYIDLIADYITDNVLNDTEKEFNLTVVYG
ADVDVATIINAAKRYPMMSEHQVVVVKEAQAVRNMEELSYYLQKPLHSTILVICHKHGTL
DRRKKLAAEVEKTGVLFESKKIKDAQLPAFIASYMKRKGVDMEPKATVMLADFVGSDLSR
LTGELEKLIITLPAGQKRVTPEQIEKNIGISKDYNNFELRSALVEKDILKANKIIKYFEE
NPKTNPIQMTLSLLFSFYSNLMLAYYAPDKSEQGIATMLGLRTPWQAKDYMAAMRKYSGV
KTMQIVGEIRYADAKSKGVKNSSMSDGDILRELVFKILH
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaagagctgacctgtgatgatatcctcaaggaattaaaggcaaagcagtat
cgtcctatttattatttaatgggagaggaatcgtactatatcgacctgatagccgattac
attactgataatgtgttgaacgatacggaaaaggaattcaacctgactgtggtatacggg
gctgatgtagatgtagcgactatcataaatgctgccaagcgttatccgatgatgtccgaa
catcaagtggtagtagtcaaggaggcacaagcagtgcgtaacatggaggaactgtcttac
tatcttcagaagccgcttcattcaactatcttggtaatatgccataagcatggtacattg
gaccgcagaaagaagttggccgccgaagttgaaaagacgggtgtgctgtttgaatctaaa
aagataaaagatgcacagctcccagccttcattgcttcttacatgaaacggaaaggcgta
gacatggaacccaaggcaacagtcatgctcgctgattttgtcggctcagatttaagtcgg
ctgacaggagaactggagaaattgattattactttacccgcaggacagaaacgtgttact
cccgaacagattgaaaagaatatcggcattagcaaggattataataactttgaattgcga
agtgcactagtggaaaaagacattcttaaagcaaataaaataataaaatattttgaggag
aatccgaaaactaacccgattcaaatgacattgtctctgctgtttagtttctattccaac
ttaatgttggcatattatgctcctgacaaatcggagcagggaatcgctacaatgttagga
ctaagaacgccctggcaagctaaagattatatggcggcaatgcgtaaatatagcggagtt
aagacgatgcaaatcgttggagaaatacgatatgctgatgcaaaatcaaaaggagtgaaa
aatagttctatgtcggacggagatattctgcgtgaattagtgtttaaaattcttcattag
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