Bacteroides caccae: CGC64_15790
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Entry
CGC64_15790 CDS
T05064
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
bcac
Bacteroides caccae
Brite
KEGG Orthology (KO) [BR:
bcac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcac03032
]
CGC64_15790
03036 Chromosome and associated proteins [BR:
bcac03036
]
CGC64_15790
03400 DNA repair and recombination proteins [BR:
bcac03400
]
CGC64_15790
DNA replication proteins [BR:
bcac03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CGC64_15790
Chromosome and associated proteins [BR:
bcac03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CGC64_15790
DNA repair and recombination proteins [BR:
bcac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CGC64_15790
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ASM67257
UniProt:
A0A174SLK6
LinkDB
All DBs
Position
3826791..3827066
Genome browser
AA seq
91 aa
AA seq
DB search
MTKADIVNEITKKTGIDKTTVLTTVEAFMDAVKDSLSNDENVYLRGFGSFVVKKRAQKTA
RNISKNTTIIIPEHNIPAFKPAKTFTISVKK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcagatattgtaaacgagattacaaagaaaaccggtattgacaagacaacc
gttcttacaacagttgaagcattcatggatgccgtaaaagattcgttgtctaacgatgag
aatgtataccttcgtggatttggtagcttcgtggtgaagaaaagagcccagaagactgct
cgcaacatttccaagaatactactatcatcatccccgagcacaacattccggctttcaaa
ccggctaagacatttacaatctcagtaaaaaaataa
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