Bacteroides caccae: CGC64_17165
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Entry
CGC64_17165 CDS
T05064
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bcac
Bacteroides caccae
Pathway
bcac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGC64_17165 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcac03019
]
CGC64_17165 (recQ)
03400 DNA repair and recombination proteins [BR:
bcac03400
]
CGC64_17165 (recQ)
Enzymes [BR:
bcac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGC64_17165 (recQ)
Messenger RNA biogenesis [BR:
bcac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CGC64_17165 (recQ)
DNA repair and recombination proteins [BR:
bcac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CGC64_17165 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Helicase_Sgs1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ASW16365
UniProt:
A0A174M6J2
LinkDB
All DBs
Position
4188539..4190344
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AA seq
601 aa
AA seq
DB search
MRETLKTYFGYDSFRPLQEEIIRHIMSRQDALVLMPTGGGKSICYQLPALLCEGTAVVVS
PLISLMKDQVEALQANGIAAGALNSSNDETENANLRRACIEGRLKLLYISPEKLLAEKDY
LLRDMHISLFAIDEAHCISQWGHDFRPEYTQMGMLHQQFPQVPIVALTATADKITREDIV
RQLHLVHPRTFISSFDRPNISLTVKRGFQAKEKNKAILEFINRHSGESGIIYCMSRSKTE
TVAQMLQKQGIRCGVYHAGLSAQKRDETQDDFINDRIQVVCATIAFGMGIDKSNVRWVIH
YNLPKSIESFYQEIGRAGRDGLPSDTVLFYSLGDLILLTKFATESNQQSINLEKLQRMQQ
YAEADICRRRILLSYFGETATEDCGNCDVCKNPPQRFDGTVIVQKALSAIARTEQQIGTG
VLIDILRGSYSAEVTGKGYQELKTFGAGREIPPRDWQDYLLQMLQLGYFEIAYNENNHLK
ITPSGSDILFGRTKAMLVVIHREEVSTSKGKKKKIVVTKELPLGLPGTESEDLFEALRGL
RKQLADQEALPAYIVLSDKVLHLLCISRPTTIEEFGSISGIGEYKKKKYGKDFVNLIRQF
V
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaactctaaaaacatatttcggttacgatagtttccgtcccttgcaagaagaa
attatccgtcatattatgagcaggcaggatgcactggtattaatgcccaccggcggagga
aagtccatctgttaccaactgccggcactgctttgcgaaggcacggctgttgtggtttct
ccactcatttcactgatgaaggaccaggtggaagcattgcaggccaacggcattgccgcc
ggagcgctgaacagcagcaacgatgaaacggaaaacgccaacctgcgccgcgcctgtatc
gaaggccgcctgaaactgctttatatatcaccggaaaagttgctggcagaaaaagactat
ctcctgcgggatatgcatatctcactgttcgctattgacgaggctcattgcatttcccaa
tggggacacgacttccgtccggaatatacgcaaatgggaatgctccaccaacaattcccg
caagtaccgatcgttgcattaaccgctactgcggataaaatcacccgcgaagacattgtc
cgccaactgcatctggttcacccccgtacctttatttcttctttcgaccggccgaacatc
agcctgactgtcaaacgaggctttcaggcaaaagaaaagaacaaggcgattctggagttt
atcaaccgacacagcggagaaagcgggattatttactgcatgagccggagcaaaacggag
accgtggcgcagatgttgcaaaagcagggaatccggtgcggagtctatcatgccggattg
tccgcacagaaacgggacgagacacaggatgattttatcaacgaccgcattcaggtggta
tgcgccacgattgcttttggtatgggaatcgacaaatcaaatgtgcgttgggtcattcat
tataatctgcccaaaagtatcgaaagtttttatcaggagatcgggcgtgccggacgtgat
gggttgccgagcgacacggttctgttctattcgctgggcgacctgatcctactgaccaag
tttgccacggaaagcaaccagcaaagcattaacctggaaaagctccaacggatgcaacag
tacgcagaagcagatatctgccggagaagaatcttattgagctatttcggtgaaacggcg
acggaggactgcggtaattgtgacgtctgcaagaaccctccgcaacggttcgacgggact
gtcattgtacaaaaggcattgagcgccattgcacgcactgaacagcagatcggtacaggc
gtattgattgacattcttcgtggaagttattcggcggaagtgaccggaaaagggtatcag
gaactaaagactttcggtgccggacgggagattccaccacgcgactggcaggattacctg
cttcaaatgctgcaactcggttatttcgaaattgcgtataatgagaacaatcatctcaaa
attacgccaagcggaagcgatattttattcggaagaacaaaagccatgctcgtcgtcatt
catcgtgaagaagtttcaacaagcaaagggaaaaagaaaaaaatagtggttacaaaagaa
ctaccactcggtttgccggggacagagagcgaagatctgtttgaagcgttgcgcggatta
agaaagcagcttgccgaccaggaagcacttcccgcttacattgttctgtcagacaaagta
ttacatttgctttgtatttcccgccccaccaccattgaagaattcggttcgatcagtggt
atcggtgaatacaaaaagaaaaaatacggaaaggacttcgtaaatctgattcggcagttc
gtctga
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