Bacteroides caccae: CGC64_17535
Help
Entry
CGC64_17535 CDS
T05064
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bcac
Bacteroides caccae
Pathway
bcac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGC64_17535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcac03019
]
CGC64_17535
Enzymes [BR:
bcac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CGC64_17535
Messenger RNA biogenesis [BR:
bcac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CGC64_17535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
ERCC3_RAD25_C
CMS1
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
ASM67498
UniProt:
A0A174THB5
LinkDB
All DBs
Position
complement(4289112..4290239)
Genome browser
AA seq
375 aa
AA seq
DB search
MTFKELNITEPILKAIKEKGYTVPTPIQEKAIPAALAKRDILGCAQTGTGKTASFAIPII
QHLQVVSKESVKRQGIKALILTPTRELALQISECIDDYSKYTRVRHGVIFGGVNQRPQVD
MLRKGIDILVATPGRLLDLMNQGHIHLDTIQYFVLDEADRMLDMGFIHDIKRILPKLPKE
KQTLFFSATMPDTIVTLTKSLLKNPVKIYITPKSSTVDSINQVVYFVEKKEKSQLLISIL
QKAEDQSVLIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTRVMV
ATDIASRGIDISELPMVINYDLPDVPETYVHRIGRTGRAGNTGTALTFCSQEERKLVNDI
QKLTGKKLNKANFTF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgacatttaaagaattaaatataaccgagccgattttaaaagcaatcaaagaaaaagga
tatacagtaccgaccccaattcaagaaaaagcgattcctgccgcattggcaaaaagagat
atattaggttgtgcgcagactggtacaggaaagacggcttcatttgccattcctatcata
caacatttgcaagtcgtgagcaaggaatctgtcaagcgtcagggtatcaaagccttgata
ttgacacctacccgtgaacttgccctgcaaatcagtgaatgcattgacgattattcaaaa
tatacccgtgttcgccacggagtgatcttcggtggtgtaaatcaacgtccgcaggttgat
atgttacgcaagggaattgatattctggtagctactccgggacgtctacttgatttgatg
aatcagggacatatacatctggatactattcagtattttgtattggatgaggctgaccgt
atgcttgacatgggatttatccatgatattaagcgaatattgccgaaacttccgaaagaa
aagcaaaccttgttcttctcggcaacaatgcctgacaccattgttactttaaccaaatct
ctgttgaagaatccggtgaagatttacataacaccgaaatcgtctactgtggactctatc
aatcaggttgtgtacttcgtagagaagaaagagaaaagtcaattattaatttcaattttg
caaaaagcagaagaccaatcggtacttatcttctcgcgtacgaagcataatgccgataag
attgttaagatattaggtaaggctgggatcggtagtcaggctatacacggaaataagagt
caggcggcaagacagtccgcattgggtaattttaagtcggggaaaacccgggttatggtt
gctactgatattgcttccagaggaatcgatataagtgagttgcctatggttattaattat
gatctcccggatgttcccgagacgtatgtacatcgtatcggtcgtacaggaagagcagga
aatacagggacagcacttacattctgttcgcaggaagaacgtaaactggttaatgatatt
cagaagttgaccggtaagaaactcaataaggctaatttcactttttga
DBGET
integrated database retrieval system
