Bergeyella cardium: DBX24_00320
Help
Entry
DBX24_00320 CDS
T06387
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bcad
Bergeyella cardium
Pathway
bcad03030
DNA replication
bcad03410
Base excision repair
bcad03420
Nucleotide excision repair
bcad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DBX24_00320 (polA)
03410 Base excision repair
DBX24_00320 (polA)
03420 Nucleotide excision repair
DBX24_00320 (polA)
03440 Homologous recombination
DBX24_00320 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcad03032
]
DBX24_00320 (polA)
03400 DNA repair and recombination proteins [BR:
bcad03400
]
DBX24_00320 (polA)
Enzymes [BR:
bcad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DBX24_00320 (polA)
DNA replication proteins [BR:
bcad03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DBX24_00320 (polA)
DNA repair and recombination proteins [BR:
bcad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DBX24_00320 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DBX24_00320 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
RNase_H_2
HHH_2
PBP2
Motif
Other DBs
NCBI-ProteinID:
QHN64442
UniProt:
A0A6P1QQT6
LinkDB
All DBs
Position
73741..76572
Genome browser
AA seq
943 aa
AA seq
DB search
MANSSDKRLFLIDAYAMIFRGYYGLIRNPRITSKGLDVSAIFGFTNSLIDLIKREKPSHL
AVVFDVGKENIRTQEFPEYKAHRSETPEAIKIGVPYIQRILEAMKIPILGVEGYEADDVI
GTVAHKAEKEGYTVFMVTPDKDFGQLVTNNIKIYKPASKGGDVEIIGIAEVKAKYGIKHP
KQVIDILAMMGDAVDNIPGLQGVGEKTALKFVQQFGSIESLIANTSKIQGKLRQKIEASA
EQGLLSKKLATIICDVPIDFEQEKYDVEKPNFEKIQKIFDEIEFKRLYENLYRAFNEPLN
MEKAKPKNPEPAQKLPTGLTRQLDLFADFEAEEQEFLITNKATIENTDHLYQFVNTPKAQ
QILVENLLKQKAVVFDTETTSLNELEAELIGLSFSYQKGLAYYIPLAEDREKALETLQIF
KPFFEKQDILKIAHNFKYDLKVLTQYGISIRGNCFDTMIAHYLLNPDGRHGMDYLSEIYL
SYTPIPIESLIGKKGKNQKTLRSVSLEQQTNYAAEDADITFQLYEKFAPQLKKENLESLF
YNVEMPLMKVLAKMELAGVALDTDWLSKESLDLENDLRELEKKIFALSREEFNINSPKQL
GDILFAKLHLDPKARKTKTGQYSTSEEVLQKLAGKHTIIGHILEYRTYQKLKSTYVDALP
QEIQPKDGRVHTHFSQTTAATGRLASLNPNLQNIPIRTLRGQQIRGAFVADKGKKIISAD
YSQIELRLIAEVSGEDNMIKAFQNGEDIHASTASKLFKVPITDVTKSQRSQAKAVNFGII
YGQSSFTLSEQTGLSRSEAKQMIDSYYQTYPMLKEFMNEQVLKARQNGFVETILGRRRHL
KDINSNNAVVRGHAERNAVNAPIQGSAADIIKIAMINIDKALHEQNLRTQMLLQVHDELL
FEAPEDELEVVAPLIRQLMESAVPTTVPLLVEVGIGNNWLEAH
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcatccgataaaagactcttcctcattgatgcgtatgcaatgattttccga
ggctattatggccttatcagaaacccgagaatcacctccaaagggcttgatgtatcagcg
atatttggctttacaaattcccttattgaccttatcaaaagagagaagccaagccacctt
gccgtagtttttgatgtaggaaaagagaatatacgaacacaggaattccccgagtataaa
gcccacagaagcgaaactccagaggcaataaaaataggtgtaccctatatccagagaatt
ttagaggcaatgaaaatccccattctaggagtagaaggctatgaggcagatgatgtgata
gggacagtcgcccataaagcagaaaaggagggctacactgtctttatggttacccctgat
aaagattttggtcagctcgtaaccaataatattaaaatctataaacccgcatcaaagggt
ggagatgttgagattatcggcatagcggaagtcaaggcaaagtatggcatcaagcatcct
aaacaagtgatagacattctcgcaatgatgggtgatgcggtggataatatccctggtctg
caaggggtgggagagaagactgcccttaaatttgttcagcagttcggttctattgaaagc
ctgatcgcaaacacctcaaaaattcagggtaagctaaggcaaaaaatagaagccagcgct
gagcaaggactactctccaaaaaattagcaacgattatttgcgatgtgccaatagacttt
gaacaggagaaatacgatgtagaaaagccaaactttgagaaaatccagaagatatttgat
gaaattgaattcaaacgattatacgaaaacctgtacagagcatttaacgagcctttgaat
atggagaaggctaaacctaaaaacccagaacccgcacaaaaactacctacggggctcaca
agacagctcgacctctttgcggattttgaagccgaagagcaggaattcctcattaccaat
aaagctacgatagagaataccgaccacctttatcagttcgtaaatacgcccaaagcgcag
cagatattagtagagaatctcctcaagcaaaaggcggtagtctttgataccgaaaccact
tcgctcaacgagctggaagcagagctcatcgggcttagcttctcctaccagaaagggctc
gcctactacatcccccttgcggaggacagagaaaaagcgttggagaccttgcaaatcttc
aaacctttttttgaaaagcaagatatccttaaaatcgctcataacttcaagtatgattta
aaagtccttacccaatacggcatcagcatcagaggaaattgctttgatacaatgattgcc
cactacctcctaaaccctgacggcaggcacggtatggattacctctcggagatttacctc
agctacacgcctatccccatcgagagcctcatcgggaagaagggcaaaaaccagaaaacc
ctcagatctgtgagcctcgagcagcaaaccaactatgccgccgaagatgcagacatcact
tttcagctctacgagaagttcgccccacagctcaaaaaggagaacctcgaaagcctcttc
tataatgtagaaatgcccctgatgaaagtcttggcaaagatggagcttgcaggggtagca
ttggataccgactggctatccaaagagagcctcgatttagaaaacgacctccgagagctt
gaaaagaagattttcgccctctctcgggaggagtttaatatcaactcccctaagcagctc
ggcgatatccttttcgctaagctccaccttgacccaaaagcgaggaaaaccaaaacaggg
caatactccacctccgaagaagtcttgcaaaagctcgctggaaagcacaccatcatcggg
catatcctcgagtaccgaacctatcagaaactgaaatctacctatgtagacgccctcccg
caggagattcagcccaaagacggaagggtgcacacccatttctcacaaaccacagcggcc
actggacgcctcgccagcctcaaccctaatctccaaaacatccccatccgaaccctcagg
gggcagcagattcgtggggctttcgtagccgataagggaaagaaaatcatctccgccgat
tattcgcaaatcgagctcaggctcatcgccgaagtttctggcgaggataatatgattaaa
gccttccagaatggcgaagacatccacgcatctaccgcctccaaactcttcaaagtcccc
ataaccgatgtaactaagtcccaaagaagccaagctaaggcagtcaatttcgggattatc
tacgggcaaagctccttcaccctatccgagcaaactgggctctcccgcagcgaagccaaa
caaatgatagactcctactaccagacctacccaatgctgaaggagtttatgaacgagcaa
gtcctcaaagcaaggcaaaacggtttcgtagaaaccatcttagggcgaagacgccaccta
aaggatatcaattctaacaatgccgtcgtaagagggcacgccgagagaaacgccgtaaac
gcaccgatacaagggagcgctgccgatattattaaaatcgcgatgattaatatcgataaa
gccctccacgagcagaatttaagaacccaaatgctcctccaagtacacgatgaactcctc
ttcgaagcccctgaggacgagctggaagtggtagctcccctcatcaggcaactaatggag
tccgccgtacccaccaccgtacccctcctcgtagaggtaggcattggcaacaactggctc
gaagcccactaa
DBGET
integrated database retrieval system