Bergeyella cardium: DBX24_00845
Help
Entry
DBX24_00845 CDS
T06387
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bcad
Bergeyella cardium
Pathway
bcad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DBX24_00845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcad03021
]
DBX24_00845
03019 Messenger RNA biogenesis [BR:
bcad03019
]
DBX24_00845
Transcription machinery [BR:
bcad03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DBX24_00845
Messenger RNA biogenesis [BR:
bcad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DBX24_00845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
AAA_25
AAA
Mor
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QHN64537
UniProt:
A0A6P1QTL7
LinkDB
All DBs
Position
171035..172819
Genome browser
AA seq
594 aa
AA seq
DB search
MFNIELLRSKSNEELTNIINALGIKVAKNSTENDKVFAILDFQAVNRQAVKEFYNANEAP
VKTEKPEETTEQKPKKRGRKPKSETQLKTEAQPKVEIPAEETPKPASKKRGRKPKTTAEQ
TQEKSVEAQQVNPTSQENIRTPEIKPERTKRKRIPTSAENISETPQESKAETETLPTETP
PAPQEPKAKNPNKNGNHQHKKQQNNHQNEQPQTEPQEEKKEFNFDGMVTIEGVLEILPDN
YGFLRSPDFSYISSPDDVYVSTAQIRNYGLKTGDMVKGIVRLPKEGEKYFSLLKPTEVNG
RDLAFIKDRVAFEYLTPLFPEEKFNLGAKNSTISTRIVDLFAPIGKGQRAMIVAQPKTGK
TMLLKDIANAISANHPEAYMMVLLIDERPEEVTDMERSVNAEVISSTFDESAEKHVKVAN
LVLAKAQRMVECGHDVVILLDSITRLARAYNTVTPASGKILSGGVDANALHRPKRFFGAA
RNIEGGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMELQLDRKIANKRIYPAIDLVASS
TRRDELLHDELTQQRMWILRKHLANMTPVEAIEFVQKHIEGTLNNEEFLMSMNK
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatatcgaactactaaggtcaaagtctaatgaagaattgaccaatatcatcaat
gctttgggcattaaagtagcaaaaaacagtactgaaaatgataaggtttttgctatttta
gacttccaagcagtaaacagacaggctgtaaaagaattttacaatgccaacgaagcgcca
gtaaaaactgagaaaccagaagaaactaccgaacaaaaacctaaaaaaagaggtagaaaa
ccaaaatctgaaactcagctaaaaacagaggctcagccaaaagtggaaattccagccgaa
gaaacaccaaagccagcaagcaaaaaaagaggcaggaaacccaaaactacagctgagcaa
acacaagagaaatcagtagaagctcagcaggtaaacccaacatcacaagaaaatatacgc
acacctgaaataaaaccagagcgtaccaaaagaaaaagaatccctacctcagcagaaaac
atttccgaaactccacaagaaagcaaagcagaaacggaaaccctccctacagaaactcca
cctgcaccacaagaaccaaaagctaaaaaccccaataaaaacggcaaccaccagcacaaa
aaacagcaaaacaatcaccaaaacgagcagcctcagacagaaccacaggaagagaaaaaa
gaattcaactttgatggtatggtcaccatagagggcgttttggagatactcccagacaac
tatggcttcctccgctcaccagatttctcttacatctcttcaccagacgatgtttatgta
tccacagctcaaatccgaaactatggactcaaaacaggggatatggtaaaaggcattgta
aggctgccaaaagaaggagagaaatacttctcacttctaaaacctacagaagtaaacggg
cgcgacctcgctttcatcaaagacagagtagcattcgagtaccttacccccctcttccca
gaagagaaattcaacctcggagcaaagaactctaccatttccacaaggattgtagacctc
ttcgcacctatcggcaaagggcaaagagcaatgattgtagcccaaccgaaaacagggaaa
acaatgctcctgaaagacatcgccaatgccatctctgccaaccacccagaggcgtatatg
atggttctcctcatcgatgagagaccagaggaagttaccgatatggagagaagcgtaaat
gcagaagtcatctcctctaccttcgacgaatctgctgaaaagcatgtaaaagtggccaat
ctcgttcttgccaaagcgcaaagaatggtagaatgcgggcacgatgtcgttatcctgctc
gattccatcacccgactggctcgtgcctacaacaccgtaacccccgcttctgggaaaata
ctctccggcggtgtagatgccaatgccctgcacagacctaaaagattcttcggtgcagcg
agaaatatcgagggtggcggttcgcttaccattattgccactgcgctcatagacactggc
tctaaaatggacgaagttatcttcgaagagtttaaaggtaccggaaatatggagctccag
ctggacaggaaaattgccaacaaacgcatctacccagcgattgatttagtagcttcgagc
acccgaagagatgagctcctccacgatgaactcacccagcaaagaatgtggattctccga
aagcacctcgctaatatgactcccgtagaagcaatagaatttgtacaaaagcacatagaa
ggcactctaaacaacgaggaattccttatgtctatgaataaataa
DBGET
integrated database retrieval system
