KEGG   Bergeyella cardium: DBX24_02440
Entry
DBX24_02440       CDS       T06387                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
bcad  Bergeyella cardium
Brite
KEGG Orthology (KO) [BR:bcad00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:bcad02048]
    DBX24_02440
Enzymes [BR:bcad01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     DBX24_02440
Prokaryotic defense system [BR:bcad02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   DBX24_02440
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 HSDR_N ResIII DEAD HSDR_N_2
Other DBs
NCBI-ProteinID: QHN64829
UniProt: A0A6P1QSR6
LinkDB
Position
542514..545618
AA seq 1034 aa
MNYNTIAETQNYIVLENYTKLSKVSEAPDTYQSENALEREFIEDLVEQGYEYLPQLTTPA
ALLNNVRTQLQNLNSVTFSDAEWARFVEEYLDAPSDNLVEKSRKLHRDYIYDFVFDDGHI
QNIYLVDKKNIIRNKVQVINQFEQKGSHANRYDVTILVNGLPLVQIELKKRGVAIREAFN
QVHRYSKESFNSESSLYKYLQLFVISNGTDTRYFANTVKRNKNSFDFTMNWARADNSLIR
DLKDFTATFFQKNTLLQVLLTYSVLDVSDTLLVMRPYQIAATERLLWKIKSAYQAKRWSS
LEGGGYIWHTTGSGKTLTSFKAAQLATQLDFIDKVFFVVDRKDLDYQTMKEYQRFSPDSV
NGSGSTAGLKQNLNKNDHKIIVTTIQKLNNLMRSEEHLPVYDQQVVFIFDEAHRSQFGEA
QKNLKKKFKKYYQFGFTGTPIFPDNALGSETTASVFGRELHAYVITDAIRDEKVLKFKVD
YNDVRPQFKGIETEQDEAKLSAAENKRLLLHPERIREISTYILRNFRLKTHRNEGSNKGF
NAMFAVSSVEAAKCYYQELNALQKNSDRPLKIATIFSYAANEEQNAIGDITDETFEPSAM
DVSAKEFLEKVIADYNAMFKTNFSLESNSFENYYRDLSNRVKSQEIDLLIVVGMFLTGFD
APMLNTLFVDKNLRYHGLLQAFSRTNRIYNSTKSFGNIVTFRDLEQPTVDTITLFGDKST
KNVILEKSYQEYLDGFTDIITGKACRGYNEIVKELQEQFPDPDEIHTSADKKAFVKLFGE
YLQVENILQNYDEFAHLKALQTIDKNDPEALKTFAKEHFLTEEQVAAMVQLDVLKERLVQ
DYKSTYNDIRDWISRERENEAQEKQLIDWEEVVFEVDLLKSQEIDLDYILGLILEHHKKN
RNKEALVDEVRRIIRASIGNRAKESLIVDFINETNLDTIKDKPSIIAAFFTYAQARQREE
ANALIVEEHLNEEATKRYIQLSLRRGLASENGTDLNSILPKMSPLNPEYRTKKQTVFRRI
AAFVEKYKGVGGEL
NT seq 3105 nt   +upstreamnt  +downstreamnt
atgaattacaacactatcgccgaaacacaaaactacatcgttttagaaaattatactaaa
ctctctaaagtgagcgaagctcctgatacttaccaaagtgaaaatgcgttagaacgcgaa
tttatagaggatttggtagaacaaggctatgaataccttccgcagcttactacccccgcc
gcactcttgaataatgtgcgcacgcagctgcaaaacctcaacagcgtaaccttttccgat
gccgaatgggcgcgctttgtagaggaatatttagatgcccccagcgataacttggtagaa
aaatcacgcaaactgcaccgcgattatatctacgactttgtgttcgacgatggacatata
caaaatatctatttggttgataagaaaaatatcattcgtaataaagtacaagtaatcaac
cagttcgaacagaaaggttctcacgccaatcgttacgatgtaactatcttagtaaatggc
ttgcccttagtgcaaatcgaactcaaaaaacgaggggtggctatccgtgaggcgttcaac
caagtgcatcgctatagcaaggagagtttcaacagcgagagttcattgtacaaatacttg
caactatttgtcatttccaacggtaccgatacccgctattttgccaacaccgtaaagcgc
aataaaaacagcttcgactttacgatgaattgggcaagagctgataattctcttatacgt
gacctgaaggattttaccgctaccttctttcagaaaaacactttgttacaggtgctactc
acctattcggtgcttgatgtaagcgacacactattagtgatgcgcccctaccaaatagcc
gctaccgaacggctgctctggaagataaaaagcgcctatcaagccaagcgctggagctct
ctcgagggaggtggttatatatggcacactacaggttcgggcaaaacgctcaccagcttt
aaagcggcacaactggctacccagctcgattttatcgataaagtgttctttgtggtagac
cgcaaagatttggattatcaaacgatgaaggagtaccaacgcttttcgcccgatagtgta
aatggctcaggtagtactgccggactcaaacagaatttaaacaagaacgaccataaaatt
atcgttactactatccagaaactcaataacctgatgaggagcgaagagcacttgccggta
tacgaccagcaagttgttttcatcttcgatgaggcacaccgttcccaatttggtgaagcg
caaaagaaccttaaaaagaaattcaagaagtactaccaatttggttttacaggcacccct
attttccccgacaatgccttgggcagcgaaaccactgccagcgtgtttggtcgcgaactg
cacgcctacgtaattaccgatgccattcgcgatgaaaaagtactgaaattcaaagtagat
tacaacgatgtacgtccgcaatttaagggtatagaaaccgagcaagatgaagccaaactc
agtgctgccgaaaacaaacgcctcttgctacaccccgaacgtattagggaaatatctacg
tacattttgcgcaatttccgcctcaaaacccacagaaatgagggtagtaataagggcttc
aatgcgatgtttgccgttagcagtgtagaggctgccaaatgctactaccaagagctcaac
gctttgcaaaaaaatagcgaccgaccgctcaagatagcgactatcttttcttatgctgcc
aatgaagaacagaatgctataggcgacattactgacgaaactttcgaaccttccgctatg
gatgtcagtgccaaagagtttttggaaaaagtcattgccgactacaacgcgatgttcaag
accaatttttctctggaaagcaattcgtttgaaaactactaccgcgacttaagcaaccga
gtgaaaagtcaagaaatagacctgctgatcgtggtaggcatgttcctcaccggctttgat
gcccctatgctcaataccctatttgtggataagaacttgcgctatcacggccttttgcag
gctttctcgcgtaccaatcgcatctataacagcaccaagagctttggcaacatcgttact
ttccgcgatttggagcaacccaccgtcgataccattactctttttggtgataagagcacc
aagaacgtcatcctcgaaaagagttaccaagagtatttggacggctttaccgacatcatt
accggaaaggcctgccgtggttataacgaaatcgtgaaagagttgcaagaacaattcccc
gaccccgatgagatccatacttcggccgacaaaaaagcctttgtaaagctcttcggagaa
tacctacaggtggaaaatattttgcaaaactatgatgagtttgcccatctcaaagcactg
caaaccattgataagaacgaccccgaagccctcaaaacctttgctaaagagcatttcctt
accgaagaacaagtagccgctatggtacaattggatgtactcaaggagcgattggtacaa
gactataaatccacttacaacgatatacgcgattggataagtagggagcgtgagaatgag
gcgcaagaaaaacaacttatagactgggaagaagtggtctttgaagtagacttgctcaag
tcgcaagagatagacctcgattacatactcggactgatcttagaacaccacaaaaagaac
cgaaacaaagaggctttggtagacgaagtacgccgtatcattagggcaagcataggcaac
cgagccaaggagagtctcatcgtggattttatcaatgaaaccaatttggacacgattaag
gacaaaccgagcatcatcgcggctttcttcacctacgcccaagcgcgacaaagagaagaa
gccaatgcccttattgtggaggaacatctaaacgaagaggccaccaagcgctacatacag
ctctccctaaggcgaggactcgctagcgaaaatggcaccgacctcaatagcattttgccg
aagatgagtccgctaaaccctgagtatcgcaccaagaaacagacggtcttccgcagaata
gccgcttttgtagagaaatataagggcgtaggaggtgagctgtaa

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