Bergeyella cardium: DBX24_04300
Help
Entry
DBX24_04300 CDS
T06387
Name
(GenBank) peptidoglycan glycosyltransferase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
bcad
Bergeyella cardium
Pathway
bcad00550
Peptidoglycan biosynthesis
bcad01100
Metabolic pathways
bcad01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
bcad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DBX24_04300
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DBX24_04300
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bcad01011
]
DBX24_04300
Enzymes [BR:
bcad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DBX24_04300
Peptidoglycan biosynthesis and degradation proteins [BR:
bcad01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
DBX24_04300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
YpmT
Motif
Other DBs
NCBI-ProteinID:
QHN65169
UniProt:
A0A6P1QTP0
LinkDB
All DBs
Position
complement(925796..927820)
Genome browser
AA seq
674 aa
AA seq
DB search
MKHQYIKITLILLLIASIFIARLAYLQLFTDRYALNALNTSIKTEYVIPQRGAVFDRNGK
ILVSNQPSYEISYTEALMKPDFDTIAFCNLVGIDENSFVERINTARKEKYFSPLTSVTFL
KNLTRKDVARIQEIIFKYPAFSIVSRPQRRYEVSTSGNLLGYTNEVNERDIKKDSLYYRP
GDNIGKSGVEKAYETTLRGEKGINYIQKDIRLRNIGSYKGGSLDKEVVTGKDITLTIDYD
LQKLAEEILVNKQGAIVALDPNNGEILAMATGPDIDPNLFTGPEKSKNLYKLQVDTLYNQ
RPTFDRSVQAAYPPGSTFKMLTALAGMQMGVMTDKTIFPCGGGFNYRGLRIKGHGGATPL
IPSLQVSSNCYFSHAFLAIVNKYPNNPSKGVDEWKEIMASFGLGVFLNNDLAVGSKGRIP
SGEYYENRQKKLNMHSSKKEGNYKNWDALSTGAVFNGMGQGDVLLTPIQMANAMAAIANK
GWYYTPHIVKSIDGKPNPDPRFKVKHKTLVEPKYFEPVLKGMEAVVQRGTARSLKTSEFT
QLAKTGTAQVPQGKDNSIFVLIAPAESPKIVVAAVMEHAGFGATWAGPAATLIAEKHITG
NIKREHLYKKMINASFMPEYKRQWVADMKRKGWYKPTKEDSLERKRKDSLKKVELQNQLK
KEQEARLNNNNSPN
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatcagtatatcaagattacgcttatcctcctgcttattgcctccatttttatt
gcgaggcttgcgtatttacagcttttcaccgatagatatgctctcaatgccctcaatacc
tctataaaaaccgagtatgttatcccacaaaggggtgccgtttttgatcgcaatggtaaa
atcctcgtgagcaaccagccttcttatgagatttcctacacagaggcgcttatgaagcct
gattttgatactatcgctttctgcaatcttgttgggattgatgaaaacagctttgtagag
cgcatcaatacggcacgaaaggagaaatacttttcccctcttacctctgttactttcctt
aaaaaccttacccgcaaagatgttgccagaatccaagaaatcatcttcaaatatcctgct
tttagtattgtttctcgtcctcagcgccgttatgaagtctctacttctgggaatctgctc
ggctataccaacgaggtaaatgagcgagacataaaaaaagattctctctattatcgtcca
ggggataatatcggtaaatcaggtgtggaaaaagcctatgaaactactttgcgcggagag
aaaggaattaactatatccaaaaagacatcaggctaaggaatatcggttcttataaagga
ggtagccttgataaagaggtggtaacgggtaaagacatcacacttacgatagattatgac
cttcaaaaactcgccgaagagattttagtgaataagcaaggcgccatcgttgcccttgac
cccaataatggcgaaattctcgctatggcaacaggcccagacattgaccccaatctcttt
acaggtccagaaaagtccaaaaacctctacaaattgcaggtagatacgctctataaccag
cgcccaacttttgataggtctgtacaggcggcttatccccctggttctacctttaagatg
cttactgcacttgcgggaatgcaaatgggagtgatgacggataagaccatcttcccctgt
ggaggaggttttaattatagagggcttaggattaaaggacacggtggagccactcccctc
atcccttctttacaagtctcgagcaactgctatttttcccacgctttccttgccattgta
aataaatatccaaataacccttccaagggcgttgatgaatggaaggaaataatggcgagc
tttggtctcggtgtctttctcaataatgaccttgccgttggctcaaaagggagaatcccc
agtggagaatattatgaaaacagacagaaaaaactcaatatgcacagctcaaagaaggag
ggtaattataaaaactgggatgcactctccacaggagctgttttcaatggtatggggcag
ggagatgtactcctcacccccatccaaatggcaaatgctatggctgccattgctaataaa
ggctggtattataccccccacatcgtaaaatcgatagatggaaagccaaaccccgaccca
agatttaaggtaaagcacaaaacccttgtagagccaaaatattttgagcccgttctcaaa
ggaatggaagccgtagtacaaagaggtactgcccgttcgcttaaaacttcggaatttaca
cagcttgctaaaacaggtactgctcaggttcctcagggtaaggataattctatcttcgta
ctcatcgcaccagcggagagtcctaaaattgttgttgccgctgttatggagcacgcaggt
tttggagctacttgggcgggtcctgccgctactctcatcgcagagaagcatattacaggg
aatatcaaaagagaacatctctataagaagatgattaatgcctcctttatgcctgagtat
aaaagacaatgggtggcagatatgaaacgcaaaggctggtacaaacccacaaaggaagac
tcccttgaacggaaaagaaaagatagtttgaaaaaggtagagctccaaaatcagcttaaa
aaagagcaggaagctcgattgaataataataattctcctaattaa
DBGET
integrated database retrieval system
