Bergeyella cardium: DBX24_04355
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Entry
DBX24_04355 CDS
T06387
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bcad
Bergeyella cardium
Pathway
bcad03030
DNA replication
bcad03430
Mismatch repair
bcad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DBX24_04355
03430 Mismatch repair
DBX24_04355
03440 Homologous recombination
DBX24_04355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcad03032
]
DBX24_04355
03400 DNA repair and recombination proteins [BR:
bcad03400
]
DBX24_04355
Enzymes [BR:
bcad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DBX24_04355
DNA replication proteins [BR:
bcad03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DBX24_04355
DNA repair and recombination proteins [BR:
bcad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DBX24_04355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
Rv2179c-like
Snapin_Pallidin
Tae4
Motif
Other DBs
NCBI-ProteinID:
QHN65179
UniProt:
A0A6P1QTQ5
LinkDB
All DBs
Position
940028..941251
Genome browser
AA seq
407 aa
AA seq
DB search
MYTIIDIESNGAGYGEEKIIDIAILRYDGHRIIDQFMSLVNPQSTITPYVQKLTSIRPKM
VKTAPKFHEIAKRIIEITEGSTLVGHNIDFDYRMLRQSFRKLGYDFKINTLDTIPLAKKL
LPNQESYSLGKLAKAIGIGITDQHRASGDARATLELFKILIDKDTDNQIIQKQFEETNAK
TYTNRVKTLTQDLPHERGIIYFQNKEGEILHTDFVWDISKAAKKVFNAKSKRWEKVQNTC
EQIHYELSGHPIIARLQMKVKGIQKRQSFPYGLYPHNEHLSAEKTALNKGIQPLIKFSSF
TQGRKALSFIQENKTQYSAEQLRAEFDLSRRTEIWTIKGRNRSEKAFIILEQGKITAFGF
YEYFNQIQSLEKLNQLKIPVSISRRETENLLKLSILQRDFKPSPIPL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtatactataatagatattgagagcaatggtgcaggctacggtgaggagaaaatcata
gatatcgctatattgagatacgacggccaccgcatcatagatcagtttatgtctctggtg
aatccacagagcaccattacgccttatgttcagaagctcacaagcatccgcccgaagatg
gtaaaaaccgctcccaagtttcacgaaatcgctaaacgaattatagaaattaccgaagga
agtacactcgtcgggcataatatcgactttgattaccgtatgcttcgtcaatcttttaga
aaactcggctacgattttaagataaatacattagacaccatccctctcgcgaagaaatta
ctccccaaccaagaaagttattcattgggtaagctagcaaaagccatcggaatagggatt
accgaccagcacagagcctctggagatgccagagctaccctcgagctcttcaaaatcctt
atcgataaagacactgataaccaaatcatccaaaaacaattcgaagaaaccaacgcaaaa
acctataccaacagggtaaaaacccttacccaagacctccctcacgagaggggtatcatc
tatttccagaacaaggaaggagaaatcctccacaccgatttcgtatgggatatcagcaaa
gctgcaaagaaggtcttcaatgccaaatcaaagcgctgggaaaaggttcagaacacctgc
gagcagatacattatgagctctctgggcatccgattatcgccaggctccaaatgaaagta
aaaggaatccagaagagacagagctttccctacgggctttacccccacaatgagcacctc
agtgcagaaaaaactgcacttaacaaaggaatccagccccttatcaaattctcctccttc
acgcaaggcagaaaggctctgagctttatccaagaaaataaaacgcagtacagcgcagag
cagctcagagcagaatttgacctcagccgaaggactgaaatctggacaataaagggacga
aaccgcagcgagaaggcattcatcatcctcgagcaggggaaaatcaccgcctttgggttt
tatgaatatttcaaccaaatacaatcgctcgagaagctcaaccagctaaaaatccctgta
agtatcagccgcagggagacggaaaacctcctcaagctctcgattctccagcgggacttt
aaaccaagcccaatccctttgtaa
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