Bergeyella cardium: DBX24_05380
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Entry
DBX24_05380 CDS
T06387
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
bcad
Bergeyella cardium
Brite
KEGG Orthology (KO) [BR:
bcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcad03019
]
DBX24_05380
03009 Ribosome biogenesis [BR:
bcad03009
]
DBX24_05380
Messenger RNA biogenesis [BR:
bcad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DBX24_05380
Ribosome biogenesis [BR:
bcad03009
]
Prokaryotic type
rRNA processing factors
DBX24_05380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
SerK_C
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
QHN65360
UniProt:
A0A6P1QXA0
LinkDB
All DBs
Position
complement(1160193..1161749)
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AA seq
518 aa
AA seq
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MKKELIVSHEDGHTKIALLEDGRLFELHEEQGKNKFVVGDLFLGRIRKLAPNLNSAFVNI
GYEKDAFLHYQDLGPDYLSFKKYINDIFSKRQNTSSLKNFEIQKEIDKHGTVDKVLSKDD
IVLLQITKEPISTKGPRISTQISITGRFMVLIPFDDKISISKKIKNSEEKHRLRTLIESI
KPEGFGVIIRTVAENKKAADLHNDMYSLISKWENVFKNIQRHKVPSKVLSEDDLASSILR
DNFNQDFVNIICDDEKMVDDMKNYLEVIAPERKNIVQFYDSHIPLTEYYNVEKQLKQSFG
KHVNIPGSKGAYLVIEHTEALHVIDVNSGHNVVSGTTNREHALTVNKIAATEIARQLRLR
DMGGIIVIDFIDMPLPEQRRQLYDHFREEMKRDKAKHKILPPSKFGLIQMTRQRVRPEIN
IKTQEENPNAGGEIIAPIVIIERIEESIKNIIQTERGKLFLHVHPFVEAYLTKGVKSTRV
DWFLKYKKWVSIIPRDSFKYLEFRLYNSKKEELFSYSN
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaactcatcgtatctcacgaagacggacacacaaaaatagccctactagaa
gatggtagactctttgaactacacgaagagcagggcaaaaataagttcgtagtaggagat
ttatttctgggaaggataaggaaattggcaccgaacctcaattcggctttcgtcaatata
ggatacgaaaaagatgctttcttgcattatcaggatttgggacctgattatttgagcttt
aaaaagtatatcaacgatattttttctaaaaggcaaaacacttccagccttaaaaacttt
gaaatccaaaaagaaatagacaaacacggtacggtagacaaagtcctttcaaaagacgat
atcgtcctccttcaaattaccaaagaacctatttctaccaaaggtccacggatttctact
caaatctccattacaggcagatttatggtactcatcccttttgatgataaaatctcaata
tcaaaaaaaatcaagaactctgaggagaaacacaggctcagaactttaatcgagagtatt
aaacccgaaggcttcggagtaatcatcagaaccgtagcagaaaataagaaagctgctgac
ctccataatgatatgtactcactcatctccaagtgggaaaatgtatttaaaaacatacaa
aggcataaagtaccatcaaaagtccttagtgaagatgatttagcatcgtctatcttgagg
gacaacttcaaccaagatttcgtaaatatcatttgcgatgatgaaaaaatggttgatgat
atgaaaaattatctggaagtcattgctcctgaaaggaaaaacatcgttcagttttatgac
tctcatattcccctcacggagtattacaatgtagagaagcagctcaagcagagctttggg
aagcatgtaaacatccctggttccaaaggagcctatttggttattgaacacacagaagcc
ctccatgtaatcgatgtgaactctgggcacaatgtagtctctggcactactaatagggaa
catgccctcactgtaaataaaatagcggctacagaaatcgcacgccagctaagactcaga
gatatgggaggcattattgtgattgattttatagatatgcccctccccgaacaacgaaga
cagctctacgaccacttccgcgaagagatgaagcgggacaaggcgaagcataaaatactc
ccaccaagtaaattcgggctcatacaaatgaccagacaaagagtgcgcccagagattaat
attaaaacacaggaagaaaatccaaatgcaggtggggagattatagcacctattgtcatt
atagagcgaatagaagagagtataaaaaacatcatccaaaccgagagagggaaactcttt
ctccatgtacatccctttgtagaagcctatcttacaaaaggtgtaaaaagtacacgagta
gattggtttttaaaatacaaaaaatgggtatccatcattccgagagactcgttcaaatac
ttagaatttaggctctacaacagcaagaaagaagaacttttcagttattctaattaa
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