Bergeyella cardium: DBX24_05560
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Entry
DBX24_05560 CDS
T06387
Name
(GenBank) CMP deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
bcad
Bergeyella cardium
Pathway
bcad00240
Pyrimidine metabolism
bcad01100
Metabolic pathways
bcad01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
bcad00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
DBX24_05560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
bcad02044
]
DBX24_05560
Enzymes [BR:
bcad01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
DBX24_05560
Secretion system [BR:
bcad02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
DBX24_05560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
APOBEC_N
APOBEC4_like
APOBEC2
NAD1
APOBEC3
APOBEC1
APOBEC4
AID
NAD2
Motif
Other DBs
NCBI-ProteinID:
QHN65393
UniProt:
A0A6P1QWN4
LinkDB
All DBs
Position
complement(1209005..1209454)
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AA seq
149 aa
AA seq
DB search
MKHNKFDLAYLKMALEWAKLSYCERRQVGALIVKDRTIISDGFNGTPSGFENCCEDSEGN
TQWYVLHAEANAILKLASSTQSAKEATLYITLSPCKECSKLILQSGITRVVYIEDYKDME
GINLLKRGGIEVMRISKQELYPDEKNTIA
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgaagcataataaatttgatttagcctatctgaaaatggctttagaatgggcaaaactc
tcctactgcgaaaggaggcaagtgggtgcccttatcgtaaaagacagaaccattatttcc
gatgggtttaatggtacgccttctggctttgaaaactgctgcgaagacagcgaagggaac
acccaatggtatgtactccacgcagaggcaaacgctattctaaaactcgcaagctccacc
caatccgcaaaagaggctacgctctacatcaccctttcgccgtgcaaggagtgcagcaaa
ctcatcttgcaatcgggcatcacgcgggtagtctatatagaggattacaaggatatggag
ggcatcaatctgctaaaaagaggaggaatagaggtaatgagaatttcaaaacaagaactt
taccccgatgaaaaaaatactattgcttag
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integrated database retrieval system
