Bergeyella cardium: DBX24_05705
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Entry
DBX24_05705 CDS
T06387
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
bcad
Bergeyella cardium
Pathway
bcad00260
Glycine, serine and threonine metabolism
bcad00630
Glyoxylate and dicarboxylate metabolism
bcad00670
One carbon pool by folate
bcad00785
Lipoic acid metabolism
bcad01100
Metabolic pathways
bcad01110
Biosynthesis of secondary metabolites
bcad01200
Carbon metabolism
Module
bcad_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
bcad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DBX24_05705 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DBX24_05705 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DBX24_05705 (gcvP)
00670 One carbon pool by folate
DBX24_05705 (gcvP)
Enzymes [BR:
bcad01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
DBX24_05705 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
bPH_10
Motif
Other DBs
NCBI-ProteinID:
QHN65415
UniProt:
A0A6P1QUN9
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Position
complement(1241797..1244658)
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AA seq
953 aa
AA seq
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MNTTEFVNRHISLNEQDKREMLNKIGVKDTEELLSQTIPSAIRLQKDLELSTPLSEYEML
LHSKDLASKNQSYDTYIGYGYYGAILPSAIQRNILENPGWYTAYTPYQAEIAQGRLEALL
NFQTAVADLTGFPLANASLLDEGTAAAEAMHMFLGSRTREQKKNNANKFFVSEWVYPQTL
AVLKTKAEGLGVEIITGDHHTHTFDESYFGALFQNPGKNGVVADYSEIISKLKTLDLQVA
MACDILSLVKLKSPASMGADCAVGTTQRFGIPMGYGGPHAAYFACKEDYKREIPGRIIGI
SQDAYGGRALRMALQTREQHIKREKATSNICTAQVLLAVMAGMYVVYHGADGLRFIADQI
HYKTRTLADALKTIGYNVVDEPTFDTVKIKIAEEDKFSLQQTLKDQKINLNFFSEGVVSI
ALDETSTLDKMQKLLNVLASHLNKQAFKLALKENESNIPSDLLRNDEILTQEVFNKYHTE
TELMRYIKKLERKDISLVHSMISLGSCTMKLNAATEMLPLSWSEWGNIHPFVPTDQAGGY
QQLIKELEKDLAEITGFAGASLQPNSGAQGEYAGLMVIREYHKSQGNEHRNIVLIPQSAH
GTNPASAIMAGMKVVVVKNNERGEIDFEDLKAKAEEHKDHLSAVMITYPSTYGFFDSNVK
DIINLIHSLGGQVYMDGANMNAQVGYTSPGYIGADVCHLNLHKTFAIPHGGGGPGVGPIC
VAKHLVPFLPSNPNLKVGGTNAISAISSAPYGSALVLNITYAYIKMMGTAGLKKATEHAI
LNANYLKEVLAEHFPILYANEQGRVAHECIVDFRPFKSYGIEVGDVAKRLMDYGFHAPTV
SFPVAGTLMIEPTESESKAEIDRFAEALINIKKEIDEIANGTADKENNVLKNAPHTEQIV
ISDRWDKPYSREKAAYPLEWVRENKVFASVSRVDDAYGDRNLICTCNPIEAYL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaacagaatttgtaaaccgtcacatctctttgaatgaacaggacaaaagagag
atgctcaacaaaatcggtgtaaaggataccgaagaactcctttctcaaaccatcccctca
gctattcgcttacagaaagatttggagcttagtactccgctttcagagtatgaaatgctc
ctccactccaaagatttagcctctaaaaaccaaagctatgatacttatatcggctatggg
tattacggtgctatattgccatcggctatacagaggaatatccttgaaaaccctggctgg
tacacggcttataccccttatcaggcagagatagcacaagggagattagaggcattgctc
aatttccaaactgcggtagccgaccttacgggcttcccgctggcaaatgcttctttatta
gacgaaggtacagctgctgccgaagctatgcacatgttcctcggtagtagaacccgagag
caaaagaagaacaatgctaataaattctttgtttccgaatgggtatatcctcagacactt
gccgtgctcaaaaccaaagccgagggcttgggagtagagattattacaggagaccaccat
acgcacacatttgatgaaagctacttcggtgcactgttccaaaatccaggcaagaatgga
gtggttgctgattattcagagattatttccaagctcaaaaccctcgatttgcaggtggca
atggcttgtgatatcctctcccttgtaaaactcaaatcccctgcttctatgggggcagac
tgtgcggtgggtaccacccaaagattcgggattcctatgggatatggaggtccgcacgct
gcttacttcgcttgcaaggaagattataaaagagaaattcctggaagaatcatcggaata
tctcaagatgcttacggtggcagggctcttcggatggcactacaaactcgtgagcagcac
atcaagagagagaaagctacttccaacatctgtacagcgcaggtactcctcgccgtaatg
gcaggtatgtatgtggtttatcacggtgctgatggattaagattcatcgctgaccaaatt
cattataaaaccagaacgcttgccgatgctctaaaaaccataggctataatgtggtagat
gagccaacttttgataccgtaaaaatcaaaatagccgaagaggataaattcagcctgcaa
caaacattaaaagaccagaaaatcaacctcaacttcttctccgaaggggtggtgagcatt
gcattagatgaaacctccactttggataagatgcaaaaactgctcaatgtactggccagc
cacctcaacaaacaggcgtttaaattagcactaaaagaaaatgagagcaacatcccatcc
gatctattaaggaatgatgaaatcctcactcaggaggtgttcaacaagtaccatacagaa
accgagctgatgagatacatcaaaaaattagagcggaaagacatctcgcttgtacattct
atgatttccctcggctcgtgcacaatgaagctcaatgccgctaccgaaatgctccctctt
tcgtggtccgaatggggaaacatccacccatttgtccctaccgatcaggcaggaggctat
caacagctcattaaagagttggaaaaagacctcgccgaaattacaggcttcgctggtgct
tctctccagcctaattctggggcacaaggcgagtatgccggtctaatggtcatcagagaa
taccataaatcgcaaggaaatgagcacagaaatatcgttctcatcccacaatcggcgcac
ggaaccaatcctgcttccgccataatggcaggaatgaaagtcgtcgtagtaaaaaataat
gaaagaggagaaattgactttgaagacctcaaagcaaaggcagaagagcacaaagaccac
ctctctgcggtgatgattacctacccttccacctacggtttcttcgattctaatgtaaag
gatattatcaacctcatacattcgctcggtggacaggtctatatggacggtgccaatatg
aatgcacaggtgggctacacaagtcctggatatatcggggcagatgtctgtcacctcaac
cttcacaagaccttcgcaatacctcacggtggtggcggaccaggcgtggggcctatctgc
gtagcaaaacacctcgtcccattcctcccatcaaaccctaatcttaaagtgggcggcaca
aatgccatcagtgccatttcttcagcaccgtatggctccgctctcgtgctcaatatcacc
tacgcttacatcaaaatgatgggcacagcagggctgaaaaaggctaccgaacacgcaata
ctcaatgccaactacctgaaagaagttctcgccgagcacttccctatcctctatgccaat
gagcaaggcagagtagcacacgagtgtattgtggatttccgaccgttcaaatcttatgga
atagaggtgggcgatgtagcaaaacggctaatggactacggtttccacgcccctacggtg
agtttcccagtggcaggaaccctaatgatagagcctaccgaatccgaaagcaaagccgaa
atcgaccgatttgcagaagcacttatcaacatcaagaaagagattgatgaaatagccaac
ggcaccgccgataaggagaataatgtcctcaaaaatgctcctcataccgagcagatcgtc
atctccgaccgctgggacaagccttacagcagagaaaaggcagcctaccctctcgaatgg
gtgagggagaacaaagtcttcgcttccgtatctcgtgtggatgatgcctatggcgacaga
aatctcatctgcacctgtaacccgatagaagcatatctataa
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