Bergeyella cardium: DBX24_05900
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Entry
DBX24_05900 CDS
T06387
Name
(GenBank) hypothetical protein
Organism
bcad
Bergeyella cardium
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
SpvB
TcdB_toxin_midN
FG-GAP_3
DUF6443
Motif
Other DBs
NCBI-ProteinID:
QHN65445
UniProt:
A0A6P1QUR0
LinkDB
All DBs
Position
complement(1273812..1283129)
Genome browser
AA seq
3105 aa
AA seq
DB search
MKKNAFLYIIILLLFTSGLVATPWAKSVLSNIDKNPTLLSLIKGEKTPNNKQKYTGDIND
IEHPSATHFQQKIFRKSANTINYKGLSINIPEYAIKRDLRLSIINLMESNLHLPPNIVNL
TKEAAGYRILPQNIKLQKEIQVAISYDKTKIPDGYTEKDIDIFIFDKETKNWKKLQRDKI
EAGSDRVSAKTNGFSDFIAGIIKQPESPDTSGFTPTSISGLKASEPFVGIETIAPPTANS
EGSASTSFNILLPKGRAGMQPSLTLSYGHENGHSWLGTGWNLSLPSINIDTRWGVPRYDT
QKETESYTLSGEELLPNAHRQDWEDRTSDKQFFPRHEGGFNKIIRKGNSPQNYLWLINSK
SGATTTYGGNGAQLKDASGNIGYWAIAKQEDLKGNTISYEYIEENGALYPKTIYYTGKTG
DKGAYSIHFITEGGREDVQISGRLGFKQEFNKLLKRIEIKYQDQLIRAYEFVYKEGQFHK
TLLTEIKSLDAKNNLFYSHKLDYYDDVKEKGLFSDIQKWETPKDDLKYTFLGIDGFSGKP
TLAGTSRSESGGVNFRLGIGIPGIGKFNENTIGGHGGSAWGKTDAKVILQDIDGDNLPDK
IFIKDDKVYYHKNLSASGKNGFSTESIQINLPHLGKTKSNTYNFGASLQLNGKIAVNVGY
DRQISRSRTESYFMDFNGDGLVDFANNGIVYYNRLINGVPHFENSSTRTPFPINASSAPL
SSGGHTSINKDSLKLINPLHDVVRTWTAPHSGFIKIKHQYKLLENHSQERQKYKKNDGSP
KADGVRLFVQHKDSLLWKEDISADDYTLKTRKDSLQIEKGETLFFRLSSKYDGNYDLTSW
TQQISYSLINDQKDYNGLDLKNYSSVSDSLSSAVKVYTFTEASQPELKGIFKKKRTTDKV
ILRINKYDITFEQKTTLFERVFSDDEGSLDISSLNIGSFEAGESIEIRVDSPTEINWQDI
NFTPEISFSSSSNQNQKTSVKLNVNFGIFNKVDEHYFPVLVTPQQKGKLRLSLDIPDTAL
LSSLEGEVLLSAKQNGKVMSRRKYSINNGNISNITPPQEIIRDSIVANKDLFLEVSIWNK
NKDKSIARILKNNEIAINLQIKDSIKIPSNDPRYPNEKYEIITTEQKHKKYAIYEPFEEP
YTQTLFGKEFRNWGSFILNGTLANEIIDRTRLTDHKGNYDDTDDGKPNIDENNPNIDSNS
GMETSKAYFIRTTANYPLKKHFGLEDDIFVAPELMSPSRLGENDLEQYLDFSLPNIQGGM
GLALAMINESKSHSFSSDNLNASHSLGDAFVTQTMADLNGDRFPDFIRGNNVQFTAPKGN
LSSQTTNIGNFASSKTTTTGKSFNGGFQHGEPKSSLITVNYKSSGSQDANKVKNSVSISG
GLSGGNDHSEYTHTDINGDGLTDRISQNNVSYNLGYSFSQNKEINLQKINAGYTSNFSAG
LGYSAYAGSFKGGLNYTRSNNQMQNQLLDLTGDGLVDKVIYKESTILIYPNLGNKWSENP
ITIPIEKSTESVSVSYGGSADFSIPFSLWFIRFSITSGGSYGTNTNRSEATFMDINGDGH
LDYIISENEDDLRVALSNIGRTNFLKSISNATGSTFEIDYSWTPPTYQNPNSHWKLAKVS
SFDGHTGDGEDYSITQYTYQNPYYDRWERAFYGYETVKQEVLDPKTSKVLRSSLQEYFNK
DFYRKGLLKKTSTFDKNNKLISEAHNEYIILPVNTSTGKVETSNPLSAANLDSSAWLMAN
TPSLFIAPVKEYSKVYEGPDFLETSIEKSYDSHGNIISYTDNGNGTNTSKITAEIEYHES
ASPYFGGIPKSLEVKDIYGTVRKRTAEINPQTAEVTRITQFSDASTTSSTELSYDSYGNL
SKIIGAQNYKGEQSTLSYEYDEPTHSHITKITDHFGYTSSMEYDYRFNTPVKTTDRNGES
ILYTLDDKGRTASILAPKEAKAEKPYTVAYEYYPLEKVPYAKTLNYDSQHNANIETYTYS
DGLGRVIQVKKTASIFKAKDTPDDIKHIISGKQIYDALGRVTESYYPTTAPISENFEDRI
SPQPPTKNIYDEKDRVIEQILPDQSSIKTQYQIATIEHLGANEKVLKTTITDALGRASAS
FTDVQGRTLKQVQPTGIETLYKYSAIGELRSVTDAHGNITESFYDLLGRRTKLIHPDAGT
TTLQYDPAGNLIKRQTSQIREQMPDAAITYHYDFNRLKEIKYPKHPENNVRYHYGKASES
PSRRGRLWLVEDASGGVEYFYGSLGEITKEIRTIRITPTDIQTYITQYEYDSWNRIQKMV
YPDGEVLHYHYNRAGNLQSLIGFKDPGNKPAGINPPAGSSQPQDTDKEYIYIKQQGYDEF
EQKIYRLFGNNTETHYTYDPIMRRLSALKSISIQKGQNPILFQNNTYSYDLVGNILKVDN
QAPALHNLLGGASSYSYQYDELNRLINAKGSFSGEIQQADYSLQMTYNKLGGITQKALNH
NLNGTPKGYTLSYLYNDKNHPNAPSSIQELGKPKPRSYSYDGNGNPTYYDEFKSFRSMNW
DEENRLLGINDNGRLHFYTYDHKGERALKSSGESSKVVINGQTSAIINHTDNYTAYISPY
FVVNKGRFTKHYFEGTSRIVSKLGEGTFTQPAQINAGGINFIRQSALMQQARDKYIQSLG
VPPGPPTQHGIYATPEYTGQPYPSIDWKDISQNQEPPEGWPRPPKFNPPGDVPGPPVQFG
EPISPDTAQGGFGFIPNGIREKNIFFYHPDHLGSSSYITGQDGKVSQHTEYIAFGEILFD
EHNTEHTMPYLFNGKELDSETGLYYYGARYYDPRVSIFLNVDPLAEKTMTPYAYTNNNPI
MLVDPDGRSGEDPPISFGFRIGVSIGIGSNGINFNAGISAGVQYRTPNFQAVAFASANVY
GGQQLGTSYMTKGVQYDLTAGAYASIGNGTGTPHNFYTLNYNTPSPFNNTFDSSLSYGQM
LTYNSAINALGDGPGIQSQGFAGGRFGNNFSFSTNNDASAYGSDLLYNKKTDAGWTGGIA
INVGGIEFGYQNFSGYWPEFGSKGPDGKPLYPYGHVFSAENRRGTGQNGKYHQGLNRAFN
FVRKGSVTGGVFSEAWFQNWIHKKVSNDGTYIYNNQGNVNISSGK
NT seq
9318 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaacgcctttctatatattatcatccttctcctctttaccagcggactggtc
gcaaccccttgggcaaagtctgtgctttccaatattgataaaaaccctactctcctctcc
cttatcaaaggcgagaaaactccaaataataaacaaaaatacactggagatattaatgat
attgagcacccatctgctactcattttcagcaaaaaatatttagaaagtctgctaatact
attaactacaaaggactatccatcaacatacccgaatatgctatcaagagagaccttaga
ctttctattatcaacctaatggaaagtaatctgcatctccctcctaatattgttaatcta
acaaaagaggctgctggctatcggattcttcctcaaaatatcaaactccaaaaagagatt
caagtcgctatctcttatgataaaaccaaaatccccgatggatataccgaaaaagatatt
gatattttcatctttgataaagaaactaaaaactggaaaaaacttcaaagggataaaata
gaagcaggttcagacagagtaagtgcaaaaactaatggtttctctgactttattgctggg
attattaaacaacctgagtctcccgatacctcaggcttcacaccaacaagcattagcgga
ctaaaagcctctgaacctttcgtgggtatagaaactattgctccacctacagcaaactca
gaaggaagtgcaagcacctcatttaatatactccttcctaaagggagagcaggaatgcaa
ccctcactcaccctctcttatgggcacgaaaatggacattcctggctcggtacaggctgg
aatctttctttaccttccattaatatagatacacggtggggagtgccgagatatgatact
caaaaagaaacagaatcttataccctctctggtgaagaactcctacctaatgctcataga
caggactgggaagacagaacctccgacaaacaatttttcccaaggcacgaaggaggattt
aataaaatcatacgaaaaggaaactctccccaaaactatctttggctgattaactcaaaa
tctggagctacaactacctatggtggaaatggggcacaactcaaagatgcctctggaaat
atcggctactgggctatagccaaacaggaagatcttaaaggaaataccatctcctatgaa
tatattgaggaaaacggtgccctctaccctaaaaccatctactacacaggaaaaactggt
gataaaggtgcatactccattcattttattaccgaaggaggaagagaagatgtacaaatc
tctggaaggcttggctttaagcaggaatttaataaactcctgaaaagaattgaaattaaa
taccaagatcagctcatcagggcttatgaattcgtatacaaagaagggcaattccataaa
acactcctcacagaaattaaatcccttgatgctaaaaataacctcttctactcccataaa
ctcgactactacgatgatgtaaaagaaaaaggtctcttctcagatatccaaaaatgggaa
acaccaaaggatgaccttaagtatactttcttgggtattgatggcttttcgggcaagcct
accttggcaggaacatcaagatctgaaagtgggggtgtaaactttagactgggaatagga
ataccaggtattggaaaatttaatgaaaataccataggaggacacggaggaagtgcctgg
ggaaagactgatgccaaagtaatactccaagacatagatggagacaatctgccagataaa
atctttataaaagatgataaagtctattatcataaaaatttatccgcatctgggaaaaat
ggattctctaccgaaagcatacaaataaatctccctcacttggggaaaaccaagtctaac
acctataattttggagccagccttcaacttaacggaaaaatagcggtaaatgtagggtat
gacaggcaaatatccagaagcagaactgaaagctactttatggattttaatggagatggt
ctcgtagatttcgcgaataatggcatcgtttattataatagactcatcaatggtgttcct
cactttgaaaacagcagtactagaactcctttccctattaatgcaagcagtgctcctcta
tcatctggtgggcacacttcgataaataaagacagcttgaaacttatcaatcctctacac
gatgttgtaagaacttggacagctccccattctggatttattaaaattaaacatcaatat
aaactcttagaaaaccattctcaagaaagacaaaaatataagaaaaatgatggctcccca
aaagctgatggagtaagattatttgtacagcacaaagactcccttctttggaaagaagat
atctcagcagatgactacaccctaaaaaccagaaaagattctctccaaatagaaaaagga
gaaactctatttttcagactatcctcaaaatatgatggcaattatgacctcacttcttgg
acgcagcaaatatcctactcactaatcaacgaccaaaaagactataatggtctcgactta
aaaaactactcatccgttagcgatagcctttcttcggccgttaaagtttatacatttaca
gaagcttctcaacctgagctcaaaggaatattcaagaaaaaaagaactaccgataaagtc
attttaaggattaataaatacgatattacctttgaacaaaaaacaaccctctttgaaaga
gtattttcagatgatgaaggctctctggatataagctcccttaatataggctctttcgag
gctggagagtctatagaaatcagagttgacagccctactgaaatcaattggcaagacatt
aatttcactccagaaatctctttttcctcttcatctaatcaaaatcaaaaaacatcagta
aaacttaatgttaacttcggtatatttaataaagttgatgagcactatttccctgttctt
gtaacgcctcagcaaaaaggaaaacttaggctttccttagatattcctgatacagcgcta
ctctctagccttgagggagaagtactcctctccgctaagcaaaacgggaaggtaatgtct
cgccgtaaatattctattaataacggtaacatttccaatattacacctccgcaggaaatt
atcagagactctatcgtagcaaataaagatttgtttttagaagtaagtatttggaacaaa
aacaaagataaaagcattgccagaatacttaaaaacaatgaaatagctattaatctccaa
attaaagactctattaaaatcccgagtaacgaccctcgttatccaaatgagaaatatgaa
atcattactacagagcaaaaacacaaaaaatatgctatctatgagccttttgaagaacca
tacacccaaactctctttggaaaagaattccgaaactggggctctttcatactcaatggt
accttggctaatgagattatcgatagaacaaggctcaccgaccacaaaggaaactatgac
gatacagatgatggaaaacctaatatagacgaaaataatcctaatatagattccaactct
ggaatggaaacctccaaagcctactttataagaactacggctaactatcctctaaaaaaa
cactttggacttgaagatgacatctttgtagcaccagagctaatgtcaccatccagatta
ggagaaaatgaccttgaacagtaccttgacttctccctccccaatatccaaggaggaatg
gggcttgctctcgcaatgattaatgaaagcaaaagtcattctttctcaagtgataattta
aacgcatctcattcattaggcgatgctttcgttacccaaacaatggctgacctcaatggc
gatagatttcccgattttatccgcggaaataatgtacagtttaccgctccaaaaggaaat
ctctcctcacaaacaaccaatattggcaactttgcttcatctaagaccactactactggt
aaatcttttaatggcggtttccagcacggagaacctaaatcctctctcatcactgtaaat
tataaatcttcgggtagccaggatgccaataaggtaaaaaactcagtctctatatccgga
gggctatctggagggaatgaccattcggaatacacccacaccgatattaatggcgatgga
cttacagaccgtatctctcaaaataatgtgagctataacttggggtattccttctctcaa
aataaagaaattaatcttcaaaaaattaatgctggatatacatctaatttttctgctgga
ttaggatactccgcctatgccggttcctttaaaggtgggctcaactatacccgatctaat
aaccaaatgcaaaaccagctcttagaccttacaggcgatggacttgtagataaggttatc
tacaaggaaagcacaatcctcatctatccgaatcttggaaataaatggagtgaaaacccc
attaccatccctatagaaaaatcaactgaaagcgtatctgtaagttatggtggtagtgct
gatttctctattccttttagtctgtggtttattagattcagcattacatcaggagggtca
tacggtacaaataccaaccgctccgaagctacttttatggacatcaatggagatgggcat
ttagactatatcatctctgaaaatgaagatgacctgcgtgtggcgctatccaatatcggg
cgtaccaacttcctcaagtccatttccaatgctacaggaagtacttttgaaatcgattac
tcttggacgccccctacctatcaaaacccaaactctcactggaaacttgcaaaagtatct
tcattcgatgggcatactggagatggagaagactactctattactcaatatacttatcaa
aacccttactacgaccgttgggaaagagctttctatggatatgaaaccgtaaaacaagaa
gtcttagaccctaaaacatccaaagtcctaaggtcttcattacaggagtatttcaataaa
gacttctaccgcaaagggctactcaaaaaaacatctacctttgataaaaacaataaactc
atatccgaggctcacaatgagtacatcatcctcccggtgaatacctccacaggcaaagta
gagacttcaaatccgctctctgctgcgaatcttgattcttcagcctggctgatggctaat
actccatcgctctttatagcccctgtaaaagaatattctaaagtctatgaaggtccagat
ttcctcgaaacaagcattgaaaaatcatacgacagccacgggaacatcatctcctatacc
gataatggtaatggcaccaatacctccaaaatcaccgcagaaattgagtaccacgaaagt
gcttctccttactttggcggtatccctaagtctttagaagtaaaagacatctacggcact
gtaagaaaacgaaccgcagaaatcaaccctcaaactgcagaagttacccgtatcacacag
ttctcagatgcaagtaccacttcttctaccgaactctcgtatgacagttatggaaacctc
tcaaaaatcattggagctcaaaactataaaggcgagcaatctaccctctcttatgagtat
gatgagcctacccatagccatattactaaaattactgaccacttcggttatacctcctct
atggagtatgattatcgttttaatactcctgttaaaactaccgacaggaatggcgagagc
atcctctatacacttgatgataaagggcgtaccgcttctattctcgcacctaaggaagcc
aaagctgagaaaccttacaccgtagcctatgagtattatcctctcgaaaaagtaccttat
gctaaaaccttaaactacgactctcagcataatgccaatatagaaacttatacctactcc
gatggattaggtagagtaattcaagtaaagaaaactgcttctatatttaaagctaaagac
actcctgatgacatcaagcacatcatctctggaaagcaaatctatgatgctcttggaagg
gttacagaatcctactaccctactactgcacctatatccgaaaactttgaggatagaatc
tctccccagcctccaacaaaaaatatctatgatgaaaaagaccgcgttatagagcagatt
ctccctgaccagtcttccatcaaaacccaatatcaaatcgctaccatagaacatttaggg
gcaaatgaaaaagtgcttaaaaccactattaccgatgctctcggcagggcttctgcttcc
tttaccgatgtacagggaagaaccctaaaacaagttcagcctacgggtatcgaaaccctc
tataaatactctgctatcggagaactacgctctgtaaccgatgcccacggaaatattacc
gaaagtttctatgacctgctcggtaggagaaccaaactcatccatccagatgcagggact
accactctacaatacgaccctgcgggaaacctcatcaaaaggcaaacttcccaaatacgg
gagcaaatgccagatgcagccattacctatcactatgattttaatagacttaaagaaata
aaataccctaagcacccagaaaacaatgtgcgataccactacggaaaagcctccgaatct
ccaagccgaagaggtaggctatggctcgtagaagatgcctctggaggtgtggaatatttc
tatggaagcctcggagaaatcaccaaagaaatccgaaccataagaattacgcctactgat
attcagacctacatcactcagtacgaatacgactcctggaatcgtattcagaaaatggta
tatcctgatggcgaggtactccactaccactataaccgcgcggggaacctccagtctctc
attgggtttaaagacccgggaaataaacctgcaggcataaatccaccagcaggaagtagc
cagccacaagataccgacaaagaatacatctacattaaacagcaggggtatgacgagttt
gagcaaaagatatatcgactctttggtaataataccgaaacccattatacctatgaccct
ataatgcgcaggctatccgctctcaagtctataagcatacaaaaggggcaaaaccctata
ctcttccaaaacaatacctactcctacgaccttgtgggcaatatcctcaaagttgataat
caagctcctgctcttcacaacctgctcgggggtgccagctcatattcctatcagtacgac
gagctcaacaggcttattaatgcaaaaggttctttctcaggagaaatccagcaggcagac
tacagcctacaaatgacttataacaagctcggtggcattacacaaaaggcgctaaaccat
aatctcaatggcacaccaaaaggatatacgctcagctatctctataacgataaaaaccac
ccgaatgcaccgtcttctatccaagaactcggtaagccaaaaccccgctcctactcctac
gatggaaacggtaaccctacttactacgacgagtttaagtccttccgatctatgaattgg
gatgaggaaaacagactactcgggattaatgataatgggcgactgcatttctacacctac
gaccacaaaggagagcgggcactcaaaagcagcggagagtccagcaaagtcgttatcaat
gggcagacctccgctatcatcaatcataccgataactacaccgcatacatcagcccttac
tttgtggtgaataaagggcggtttaccaaacattatttcgagggaaccagcagaattgtc
tcaaaactcggtgagggcacctttacccaacctgcacaaatcaatgctgggggtatcaac
ttcatacgccagtcggctcttatgcagcaggcgcgagataaatacatccaaagccttggc
gtaccccctggtccgcctacccagcacggtatctacgccacccccgaatatactgggcag
ccctacccttccatcgattggaaagatatctcccaaaaccaagaaccgccagaaggatgg
cctcgaccacctaaattcaaccctcctggcgatgtacccggtcctcctgtacaattcggc
gaacctatctccccagataccgcacaaggtggctttggcttcatccctaatggcatccgt
gaaaaaaacatcttcttctaccaccctgaccacctcggtagctcatcgtatatcactgga
caagacggcaaagtctcccagcacacagaatacatagccttcggagagatattatttgat
gagcataatacagagcacactatgccataccttttcaacggtaaagaactagacagcgaa
actggattatactactacggagcaagatactatgacccgagagtaagcattttcttgaat
gtagacccattggcagaaaaaacaatgacaccgtacgcatataccaataataacccgata
atgttagtagaccctgatggaagaagtggagaagacccaccaataagttttggttttaga
ataggtgttagtataggaataggtagcaatggtatcaactttaatgccggaatatctgct
ggtgttcagtatagaacacctaacttccaagctgtagcatttgcaagtgcaaatgtatat
ggaggacaacagttaggaacatcttatatgacgaaaggggtacaatacgacttaacagcg
ggagcctatgcaagtataggaaatggtacgggaacacctcataatttctatacattaaac
tataatactccttctccttttaataacacctttgatagttcactttcctatggacaaatg
cttacttataattctgctataaatgcattaggagatggtcctggtatacaatcacaaggg
tttgcaggaggaaggtttggcaataatttctctttttctacaaataatgatgctagtgca
tatggttctgatttattatataataaaaagacagacgcaggatggactggaggaatagct
ataaatgtaggagggatagaatttggctaccagaattttagcggatactggcctgaattt
ggatctaagggacctgatggaaagcctttatatccatatggacatgtattctcagctgaa
aatagaaggggtacaggacaaaatgggaaatatcaccaaggattaaatcgagcgtttaat
ttcgtgagaaaaggaagtgttacaggaggggtcttctcagaagcatggtttcagaattgg
attcataagaaagtttcaaatgatgggacatacatctataataatcaaggaaatgtaaat
atatcatcaggaaaatga
DBGET
integrated database retrieval system
