Bergeyella cardium: DBX24_06500
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Entry
DBX24_06500 CDS
T06387
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
bcad
Bergeyella cardium
Pathway
bcad00521
Streptomycin biosynthesis
bcad00523
Polyketide sugar unit biosynthesis
bcad00525
Acarbose and validamycin biosynthesis
bcad00541
Biosynthesis of various nucleotide sugars
bcad01100
Metabolic pathways
bcad01110
Biosynthesis of secondary metabolites
bcad01250
Biosynthesis of nucleotide sugars
Module
bcad_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
bcad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DBX24_06500 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DBX24_06500 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
DBX24_06500 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DBX24_06500 (rfbB)
00525 Acarbose and validamycin biosynthesis
DBX24_06500 (rfbB)
Enzymes [BR:
bcad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DBX24_06500 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
3Beta_HSD
adh_short
Sacchrp_dh_NADP
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
QHN65556
UniProt:
A0A6P1QTY1
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All DBs
Position
1407090..1408169
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AA seq
359 aa
AA seq
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MKSIIITGGAGFIGSHTVREFVKNLPQTKIINLDALTYAGNLENLKDIENEPNYIFEKAD
ITQPEELRRVFEKHKPDAVVHLAAESHVDRSITDPNAFINTNVVGTANLLNLCKEFWTLN
PDHTHGRFPNEKRKNLFYHISTDEVYGALGETGFFTEETPYDPKSPYSASKAASDHLVRA
YGNTYGIPFIVSNCSNNYGPNHFPEKLIPLCIFNIINEKPLPIYGDGKYTRDWLFVIDHA
RAIFQIFNEAKTGETYNIGGFNEWQNIDLIKELIKQMDAKLGRPEGYSEKLITFVKDRPG
HDKRYAIDATKLNRDLGWKPSVTFEEGLAKTIDWFLNNQEWLENVTSGEYQKYYEKQYN
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaattattataactggtggagcgggttttattggctcccatacggtaagggag
tttgtgaaaaacttaccacaaacgaaaattattaacctcgatgcccttacctatgcaggg
aatcttgaaaacttaaaggatatagagaacgagccgaactatatctttgaaaaggcagat
attacccagcctgaagaactcagacgggtgtttgaaaagcataagcccgatgctgtagtt
cacctcgcagcagaaagccatgtggataggagcatcaccgacccgaatgcttttatcaat
accaatgtagtgggcacagcgaatttgctcaacctctgtaaagagttttggacgcttaac
ccagaccatacgcacggcagattcccaaacgaaaagcgcaaaaatcttttctatcacatc
tccacagatgaggtgtatggtgcattgggagagacgggatttttcacagaggagacgccg
tatgaccctaaatctccatactccgcgagcaaggcggcgagcgaccatttggtaagggca
tacgggaatacttacgggataccgttcatcgtttctaattgttccaacaactatggcccc
aaccacttcccagagaaattaattccgctctgtattttcaatatcattaatgaaaaacct
cttcctatctacggagatggtaaatatacccgcgactggctctttgtaatagaccacgcg
agggcaattttccaaatctttaatgaagcgaaaacaggggagacttacaatatcggaggc
tttaatgagtggcaaaatatagatctgataaaagagctcatcaagcaaatggatgccaag
ctcggcagaccagaaggctactccgaaaagctcattacctttgtgaaagaccgtccaggg
cacgataaacgatacgcaatagacgctaccaagctcaatagagacctcggctggaagcca
tcggtaacctttgaggaaggattggcgaagacgatagactggttcctaaacaaccaagaa
tggttagaaaatgtaaccagcggtgagtatcagaagtactatgaaaaacaatacaattaa
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