Bergeyella cardium: DBX24_07545
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Entry
DBX24_07545 CDS
T06387
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bcad
Bergeyella cardium
Pathway
bcad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DBX24_07545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcad03019
]
DBX24_07545
03016 Transfer RNA biogenesis [BR:
bcad03016
]
DBX24_07545
Enzymes [BR:
bcad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DBX24_07545
Messenger RNA biogenesis [BR:
bcad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DBX24_07545
Transfer RNA biogenesis [BR:
bcad03016
]
Prokaryotic type
tRNA degradation factors
DBX24_07545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_2
KH-I_KHDC4-BBP
Peptidase_M76
RGS
Motif
Other DBs
NCBI-ProteinID:
QHN65743
UniProt:
A0A6P1QXK2
LinkDB
All DBs
Position
1634769..1636928
Genome browser
AA seq
719 aa
AA seq
DB search
MNAPQAIKETILLKDGREVTIETGKLAKQADGAVVVKCGGTMLLATVVAAKEANPGTDFL
PLTVDYREKFYAGGRIPGNFFRRETKPSDDEVLTMRLVDRVLRPLFPDDFHAEVQVMISL
ISYDKEVMPEALAGLAASAAIAITDIPFNGPMSEVRVVRIDGKLSINPSYENLLKADIDI
MVGATKDSIVMVEGEMKEISEQEMLEAIQFAHEEIKVQIQAQERLAERVGKSLPKREYCH
EEHDEEIREKVWKECYDKVYQIAKIPSNKEERAEKFQAILDEFLAPYAEDEEELERVTPF
AETYYHDVQKEAMRQMILEEQIRLDGRDPFTIRPIWSEVDYLPGAHGSAVFTRGETQSLT
AVTLGSIKDANLIDSVITQHDEKFFLHYNFPPFSTGEARPLRGTSRREVGHGNLAQRALQ
AVIPEDNPYTIRVVSDILESNGSSSMATVCAGTLALMDAGVQITKPVSGIAMGLITDEKT
GKWTVLSDILGDEDHLGDMDFKVTGTADGITACQMDIKIQGLSMDIMEKALLQAKEGRLH
ILGKITETLSTPRPDVKPHAPKMVLMEIPKDFIGAVIGPGGKIIQQMQKDTDTVISIEER
DEIGYIEIAGTDREKINQAVAMINEIAFVPVVGEVYKGKVVKIMDFGAFIQLAKGTEGLL
HISEIDWKRTDKVPYKEGDEVEVKFMGYDNRRKMKLSRKVLLPRPQKENKPKAEQNAQS
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaccacaagcaatcaaagaaactatcctgctaaaagatggcagggaagttacc
atcgaaacaggcaaactggctaaacaagccgacggagccgtagtagtaaaatgtggcggt
acaatgctcctcgcaaccgtagttgccgcaaaagaagccaacccaggtacggacttccta
ccgctaacggtagactacagagagaagttctacgcaggaggaagaattccagggaacttc
ttcagaagagaaaccaaaccatcggatgacgaagtccttacaatgcgtttggtagacagg
gtactccgcccgcttttcccagatgacttccacgcagaggttcaggtgatgatttccctc
atttcctacgacaaagaagtaatgccagaagcattggcaggtcttgcggcatcggctgca
atcgccattacagatatcccttttaatggacctatgtctgaggtaagagttgtgagaata
gacggcaagctgtccatcaatccaagctatgaaaacctcctcaaagcagatatagacatt
atggtaggcgctacgaaagactctatcgtaatggtggaaggtgagatgaaggaaatctcc
gagcaggaaatgcttgaagccatccaatttgcacacgaggaaataaaagtacagatacag
gctcaggaaaggctcgctgagagggtagggaagtctcttcccaagagagaatactgccac
gaggagcacgatgaggaaatccgcgagaaagtttggaaagaatgctacgataaggtttat
cagatagcgaaaatcccttccaataaagaggaaagagcagagaagtttcaagcgatattg
gatgaattcctcgctccttatgcagaagatgaagaggaactcgagagagtaacgccattt
gctgaaacctactaccacgatgtgcagaaggaagcaatgcgccagatgatattagaggag
caaatccgattagacggaagagacccatttaccatccgcccaatatggtcagaggtagat
tatttaccaggagcacacggctctgcggtatttaccagaggagaaactcagtcgctcacg
gcagttacgctcgggtctattaaagatgccaatcttatcgacagtgtgattacccagcac
gatgagaaattcttcctccactataactttcctccgttctccacaggagaggcacgcccg
ctaagaggtacttcaaggagagaagtggggcatggtaacctcgctcagagagcattacaa
gccgtaattccagaagataatccttacaccatcagagtggtttccgatattttggaatcc
aacggttcatcatctatggctacggtttgtgcaggtacattagcactaatggatgcaggg
gtacagattacaaaacctgtatcaggtatcgcaatgggacttattaccgatgaaaaaaca
ggaaagtggacggttctctccgatatcttgggagatgaagatcacctcggagatatggac
tttaaggtaacaggtaccgctgatggtattaccgcttgccagatggatattaaaatccag
gggctttctatggatattatggagaaagcactcctccaagcaaaagagggaaggctgcac
attctcggtaagattaccgaaaccctttctacaccgagaccagatgtgaaacctcacgca
ccgaagatggttctaatggaaatcccgaaagacttcatcggagcagtaataggtcctggt
ggtaagattatccaacaaatgcagaaagatacggataccgttatctctattgaagaaaga
gatgaaatcggttatatagaaattgcaggtaccgacagagagaaaatcaatcaagctgta
gcgatgattaatgaaattgcttttgtacctgtagtaggcgaggtttataaaggaaaagta
gtgaagattatggatttcggagcgtttatacagcttgcgaaaggtaccgaagggcttctc
cacatctccgaaatagactggaagcgtaccgataaagtcccttacaaagaaggcgatgag
gtagaagtgaagtttatgggctacgataaccgtaggaagatgaaactctcccgaaaagtc
ctcctgccaagacctcaaaaagagaataaacccaaagccgagcaaaacgctcaatcataa
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