Bergeyella cardium: DBX24_07595
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Entry
DBX24_07595 CDS
T06387
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bcad
Bergeyella cardium
Pathway
bcad03420
Nucleotide excision repair
bcad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DBX24_07595
03430 Mismatch repair
DBX24_07595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcad03400
]
DBX24_07595
Enzymes [BR:
bcad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DBX24_07595
DNA repair and recombination proteins [BR:
bcad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DBX24_07595
MMR (mismatch excision repair)
Other MMR factors
DBX24_07595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
Motif
Other DBs
NCBI-ProteinID:
QHN65753
UniProt:
A0A6P1QXL3
LinkDB
All DBs
Position
complement(1651394..1653733)
Genome browser
AA seq
779 aa
AA seq
DB search
MEDYLRGLNKNQYEAVTTLSGPLMVLAGAGSGKTRVLTMRIAHLITNGVDPFNILALTFT
NKAAREMKDRIAKVVGISDAKSIWMGTFHSVFARILRIEAHHLGFPSNFTIYDTQDSLNV
LKKVIKEMNIDPDFYKPKKVQSRISTYKNNLITVRAYFNNSELMEADAQANMKHIGEIYK
RYVEACFRNGAMDFDDLLLRTNELLTRFPEVLAKYQDRFRYILVDEYQDTNHSQYLIVKA
LASKFENLCVVGDDAQSIYSFRGANIQNILNFKKDYPDAITVSLEQNYRSTQNIVGAANA
IISKNIEQFPKNVFSDNEVGDKIKIYRALSDADEANFVATNIWNLHNQEQRQYGDFAILY
RTNSQTRALEDALRKKNIPYRVYGGLSFYQRKEVKDLIAYLRLLVNENDNEALLRIINYP
GRGIGETTQNKLIVFADSINQPLSQVLNKLSHYAPQLKINNTTLNKLGDFWSMIQAFRVM
LKTENAYTVAMEVAKRSGLIKTLKEDQTPEGISRVENIQEIMNSMQGFIDEQLQLEDGDA
SLSNFLENIALSTDQDKKEDDDEDKVSLMTIHLSKGLEFPVVHLVGLEENLFPSFLSTST
REELEEERRLFYVALTRAEKQAFFTYAISRFQWGKITDCEPSRFISEVDTRFIDFINPTV
ERKVINRSGLKSDIFDDTPPTPKSFKKIEPKKPLNLKKESPMPAPKRLNPIAKAQINNPS
GGSTQNIEVGDRVRHDRFGIGEVLLLDGTDPQNIKAKILFEGNDEKNLLLKFAKLIKIS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggaagactacttgagagggcttaataaaaatcaatacgaagctgtaactacccttagt
ggacctctaatggtgctggcaggggcggggtctgggaagactcgtgtgctcacaatgcgc
attgcccacctcatcaccaatggggtagatcctttcaatatactggcgcttacctttacc
aataaagctgctcgagagatgaaagatcgaattgccaaagtagtaggcattagcgatgct
aaaagcatttggatgggaaccttccactcagtatttgcaaggatacttagaatagaggct
catcacctcggctttccatccaactttaccatctacgatactcaggactctctcaatgta
ctgaaaaaagtcatcaaagaaatgaatatagatcccgatttctataaaccaaagaaagta
cagtccagaatatccacctataaaaacaacctcattacagtaagggcttatttcaataat
tctgagctgatggaagccgatgcacaagccaatatgaaacatatcggtgagatatataaa
aggtatgtagaggcttgtttcagaaatggtgctatggactttgatgacctcctgctcagg
acaaatgaattgcttacgaggtttcccgaagtactcgcaaagtatcaggacaggtttcga
tacattctcgtagatgagtaccaggatacaaaccactcgcaatacctcatcgtaaaagct
cttgcctcgaagtttgaaaacctctgcgtggtgggcgatgatgcccaatctatctactcc
tttcgaggagcaaatattcaaaacatcctcaactttaaaaaagactatcccgatgcaata
acagtatctctggagcagaactaccgatctacacaaaatatagtaggagcagcaaatgct
attatttccaagaatatagagcagttcccaaaaaatgtttttagtgacaatgaagttggt
gataaaataaaaatataccgcgccctctccgatgctgatgaggcaaacttcgtagcaacc
aatatctggaaccttcacaaccaagaacagagacagtatggagatttcgccatactctat
agaaccaactcccaaacccgcgctctcgaagatgccctgaggaagaagaatattccctat
cgggtatatggcggactgtctttctatcaaagaaaagaggtgaaggatttaatagcctac
ctccgccttttggtgaatgaaaatgataatgaggcactgctaagaatcatcaactaccca
ggcagaggcatcggagagactactcagaataagctcatcgtctttgcagattctattaat
caaccgctctctcaagtgctgaacaagctctctcattatgctccacagctcaaaataaac
aatactacgctaaataaactgggagatttttggtcaatgattcaagcattccgagtaatg
ctaaaaaccgaaaatgcctacaccgtagctatggaagttgccaaacgaagcgggctcatc
aaaaccctgaaggaagaccaaacgccagaaggcatctctcgagtagaaaatatccaagag
ataatgaattcaatgcaaggcttcatagacgaacagcttcagttagaagacggcgatgcc
tcgctctccaatttcttggaaaatatagccctctctaccgatcaagataaaaaagaagac
gatgatgaggataaagtttccctaatgaccatccacctctctaaagggttggaatttcct
gttgtgcatctcgtaggtttagaagaaaatctctttccgagttttctcagtacctctaca
cgggaggaattagaagaagagcgccgcctattctatgtagccctcaccagagccgagaag
caggcattcttcacctacgctatatctcgtttccagtggggaaaaattactgattgcgaa
ccaagccgattcataagcgaggtagatactcggtttatagacttcataaaccccactgtc
gagaggaaagtcatcaaccgctctggcttaaaatctgatatttttgatgatactccaccc
actccaaaaagttttaaaaagattgaacctaagaaacctcttaaccttaaaaaagaaagt
cctatgcctgcgcctaagcgactaaatcctattgccaaagcacaaatcaataacccatca
ggaggctctactcaaaatattgaggtaggagaccgagtaaggcacgacagatttggcata
ggcgaagttctcctccttgacggtacagaccctcaaaatataaaagccaaaatcctcttc
gaaggaaatgatgagaaaaacctcctcctaaaatttgcaaaacttataaaaattagctaa
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