Bergeyella cardium: DBX24_08260
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Entry
DBX24_08260 CDS
T06387
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
bcad
Bergeyella cardium
Brite
KEGG Orthology (KO) [BR:
bcad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bcad02000
]
DBX24_08260
Transporters [BR:
bcad02000
]
Other transporters
Pores ion channels [TC:
1
]
DBX24_08260
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
QHN65871
UniProt:
A0A6P1QY97
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All DBs
Position
complement(1800334..1802346)
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AA seq
670 aa
AA seq
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MSFSTSFQCYILILFLLFGHYVSAQRGADSLQTIQTLELYKRNFKEVIPVQVLSGKELQR
LNSHSVADALRYFSGVQIKDYGGIGGLKTINIRSLGSHHTGVFYDGIQLGNAQNGIVDLG
RFSLDDVEEIALYNGQKSDIFQPAKDFGSSGSIYIQPKRPLFSNGRKTNLILRLKNSSIS
LFNPSFRLEQRLSAHTSASISGEFLESDGIYRFRYTKKKLDGSIAYDTLAKRYDSDIQSK
RLETAIFTKLDRGSWEARAYAYQSNRGLPAPIVNGGFKERGQRLRDENYFLQTTLRKKLF
PSIETQLKTKLAYDYTHYADTATTTKLHKIQNTYIQREAYLSSSNIYSINPSWDISLSAD
FQFNNLSADLPLFSFPTRYTELVAFATTYQKGGVKVLGSLLGTFVQEEVKRNAASPDKSE
WSPSLFLSYQLKNQGVSFRAFYKKSFRMPTFNDLYYTIIGTSNLQPEYTHQYNLGLSFQK
ENEAKIVRQLQLKADVYFNKVENKIIAAPNGSMFRWMMKNLGYVEIIGTDIQLQTTLQMG
NFNLRPLLNYTYQSAKNLTDKSDSYYNHQIPYTPLHSGSFSLISDYKGWGLHYSFIYAGK
RYNALQNNIRYYEIQPWYTHDIALQKEFKVGTNKFKVSLEANNLLNQYYEVVTNYPMPGR
NFKLVLNWNL
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttctacctcctttcagtgctatattctcattttgtttttactttttgggcat
tatgtttctgcacagaggggagcagacagcctccaaacaatacaaacactggaattatac
aaaaggaatttcaaagaggtgattcctgtacaagtgcttagcggtaaggagctccaaaga
cttaattctcattcggtggcagatgctctgaggtatttctctggtgttcagattaaggat
tacggaggtataggagggctaaaaaccattaatattcggagtcttgggagccatcatacg
ggtgttttttatgatggtatccagcttggaaatgcacagaacggaattgtagatttaggt
cggttttctttggatgatgtagaggaaatagccctttataatgggcagaaatccgatata
tttcagccagcgaaagattttggttcgtcggggagtatttatattcagcctaaaaggcct
ttattttcaaatggaaggaaaaccaatctcattttaaggcttaaaaattcgtctatttcg
cttttcaatccctcttttcggctggagcagaggctttcagctcatacttctgcgagtatt
agtggtgagtttctggaaagtgatggcatctaccgcttccgatatactaaaaagaagctc
gatgggagtatcgcctatgatacgcttgctaagaggtatgatagtgatattcaatccaaa
agattagagactgcgatattcactaaactcgatagaggcagttgggaggcgagggcttat
gcttatcagtccaaccgagggcttcccgcgccgattgtgaatggcggttttaaggaaaga
gggcaaaggttgagggacgagaattattttctgcaaaccacattgcgtaaaaagctgttc
cccagcattgaaacacagcttaaaaccaaacttgcttacgactatacccattatgcagac
acggcgaccaccaccaagctccacaagattcaaaatacttatattcagagggaagcctac
ctctcctcatccaatatttactccatcaatccaagttgggacatcagcttaagcgcagat
ttccaattcaataatcttagtgccgacctgccactcttctctttccccacccgatacaca
gagctcgtagcctttgctacaacttaccaaaagggaggcgttaaggtactgggcagcctc
cttggcaccttcgttcaagaggaagtgaagcgcaatgcagcctctcccgacaaatccgaa
tggtcgccctccctcttcctaagctatcaattgaagaatcaaggcgttagtttccgagca
ttttataaaaagagcttcagaatgcctacatttaacgacctctattacaccataatcggc
acctcaaaccttcagcccgaatacactcatcaatataaccttgggctaagctttcagaag
gagaatgaagctaaaatagtgagacagcttcagctaaaggcagatgtgtatttcaacaaa
gtagaaaataaaatcatcgctgcacctaacggcagtatgtttagatggatgatgaagaac
cttggatatgtggaaattatcggtacggatattcaactgcaaactacgcttcagatgggg
aattttaaccttcgtccgctcttaaattatacttatcagtcagcaaaaaatctcaccgat
aagtcagattcatattacaaccatcaaattccatatacccccctacatagcggtagtttt
tcgttaatttcagactataaaggctgggggctacattacagtttcatttatgcaggcaag
cggtataatgcacttcaaaacaacatccgttattatgaaatccagccttggtatactcac
gatattgcattgcaaaaagaatttaaagttggaactaataaatttaaagtatctttggag
gcgaataatctcctcaatcagtactacgaagttgtaacaaactatccaatgcctggtaga
aacttcaaactggtactcaactggaacttatag
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