Bacteroides caecimuris: A4V03_01650
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Entry
A4V03_01650 CDS
T05202
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bcae
Bacteroides caecimuris
Pathway
bcae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4V03_01650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcae03019
]
A4V03_01650
03400 DNA repair and recombination proteins [BR:
bcae03400
]
A4V03_01650
Enzymes [BR:
bcae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4V03_01650
Messenger RNA biogenesis [BR:
bcae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A4V03_01650
DNA repair and recombination proteins [BR:
bcae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A4V03_01650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
TrmB
ResIII
HTH_9
UDPGT
KGK
DUF1796
Motif
Other DBs
NCBI-ProteinID:
ANU56432
UniProt:
A0A1C7GXV3
LinkDB
All DBs
Position
complement(432340..434244)
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AA seq
634 aa
AA seq
DB search
MNKYQEILKQYWGYDSFRDLQEEIITSIGEGKDTLGLMPTGGGKSITFQVPALAQEGICI
VITPLIALMKDQVQNLRKRGIKALAVYSGMTRQEILTALENCIFGDYKFLYISPERLDTD
IFRTKLRSMKVSMITVDESHCISQWGYDFRPAYLKIAEIRALLPGIPVLALTATATPEVV
KDIQARLDFREENVFRMSFERKNLAYMVRQTDNKTQELLHILRKVPGSAIIYVRNRRRTK
EITELLVNEDITADFYHAGLDNAVKDLRQKRWQSGEVRVMVATNAFGMGIDKPDVRIVLH
LDLPDSPEAYFQEAGRAGRDGKKAYAVILYTKTDRTTLHKRVVDTFPDKEYILNVYEHLQ
YYYQMAMGDGFQCVREFNLEEFCRKFKYFPVPVDSALKILTQAGYLEYTDEQDNASRILF
TIRRDELYKLREMGTEAEALIQMILRSYTGVFTDYAYISEATLSVRTGLTREQIYNILVT
LTKRRIVDYIPHKKTPYIIYTRERQELRFVHIPPAVYEERKARYEARIKAMEEYVISENV
CRSRMLLRYFGEKNEHNCGQCDVCLSHRATDTLTGESLEELKKKIAELLAQKPHTPAEIA
EKIEAEKERVSEVIQYLLEEGEWKMQNGMIHISK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
ttgaataagtatcaggagatattaaaacaatattggggatatgactccttccgcgacttg
caggaggagatcatcaccagtatcggcgaaggcaaagatacactggggctcatgcctacc
ggaggcggtaagtccatcacctttcaagtgcctgctctcgcccaggaagggatttgcatt
gtcattactccgctcatcgccctgatgaaggaccaagtgcagaacctccgcaaacgcggt
atcaaagctcttgccgtatattccggcatgacgcggcaggaaattctcactgcacttgaa
aactgcatctttggtgattacaaattcctttatatttctccggaacgtctggacacggac
atattccgcaccaaactgcggtcgatgaaagtctctatgattacggttgacgaaagtcac
tgtatctcacaatggggatatgacttccgccccgcttacctgaaaattgccgagatacgg
gcactgttaccgggaattccggtactggcacttaccgccaccgccactccggaagtggtg
aaagatattcaagctcgcttggatttccgtgaagagaatgttttccgcatgagtttcgag
cggaaaaacctggcgtatatggtacggcaaacagataacaagactcaagaactgttgcat
atcttacgaaaggtaccgggcagcgccattatctatgtccgcaacagacgacgaaccaaa
gaaatcaccgaattactggtaaatgaagatatcaccgccgacttttatcacgccggactg
gataatgccgtaaaggacctccgtcaaaaacgttggcaaagcggcgaagttcgtgtgatg
gtagctaccaatgcttttggcatggggattgataagcccgatgtgcgtatcgtattgcat
ctcgacctccccgattctcctgaagcctattttcaggaagccggacgtgcaggaagagac
ggtaagaaagcgtatgctgtaatcttatatactaaaacggacagaacgacgttacacaag
cgtgtagtggatacttttcccgataaagaatatatcctcaatgtgtacgagcatctgcaa
tattactatcagatggcaatgggcgacggtttccaatgtgtccgcgaatttaatctggaa
gagttttgccggaagttcaaatacttcccggttccagtagacagtgcgctgaagatactg
actcaagccggttatctggaatatacggacgagcaggacaacgcttcccgtattcttttt
acgattcgccgggacgaactgtacaaactgcgggaaatgggaacggaagcggaagctctg
atacagatgattctccgttcgtacaccggagtgttcaccgattatgcctatatcagcgaa
gccaccctgtccgtacgtaccggactgacccgtgaacagatttataacatattggtcacg
cttaccaaacgtcgcatcgtagattatattccgcacaaaaagactccttatattatatat
acgcgcgaacggcaggaacttcgttttgtccacatcccccctgctgtctacgaagagcgt
aaagcccggtatgaagctcgcatcaaggcgatggaagaatatgtcatttcggagaatgtg
tgccgaagccggatgctgctccgctacttcggagagaaaaacgagcataactgcggacaa
tgtgatgtttgccttagtcaccgtgcaacagatacgctgaccggggagtctcttgaagaa
ctgaaaaagaaaatagcagaattacttgcccaaaaaccgcatacgccggcagaaatagcc
gagaaaatagaagcggagaaagagagagtcagtgaagtcatccaatatttattggaggaa
ggtgagtggaagatgcagaatggaatgatacatatttcaaaataa
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