Bacteroides caecimuris: A4V03_03945
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Entry
A4V03_03945 CDS
T05202
Name
(GenBank) RNA pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
bcae
Bacteroides caecimuris
Brite
KEGG Orthology (KO) [BR:
bcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcae03009
]
A4V03_03945
03016 Transfer RNA biogenesis [BR:
bcae03016
]
A4V03_03945
Enzymes [BR:
bcae01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
A4V03_03945
5.4.99.29 23S rRNA pseudouridine746 synthase
A4V03_03945
Ribosome biogenesis [BR:
bcae03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
A4V03_03945
Transfer RNA biogenesis [BR:
bcae03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
A4V03_03945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ANU56832
UniProt:
A0A1C7GZ29
LinkDB
All DBs
Position
complement(993315..995057)
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AA seq
580 aa
AA seq
DB search
MIHFFKKPISHLALPEKFTYPFHYTPHPLCVLAAEEVKEYIANRKEWQEELASGKMFGVL
IVQTDNGITNNEENQIGYLAAFSGNLAGKNLHPYFVPPVYDLLQPEGFFKIEEEQISAIN
IRIRELENSSSYLGSKEKWKIETKHAKAVLNQAKAELKMAKKAREIRRQSSPELSEEEQA
SLIRESQYQKAEYKRLEKEWKKRLEELETEVRHFDIEIERLKTERKERSAALQRKLFEQF
RMLNAQGEVKDLYTIFEQTVQKVPPAGAGECALPKLLQYAYLHQLKPLAMAEFWWGDSPK
NEIRHHGYYYPSCKGKCEPILQHMLQGLEVDENPLLNPVHEEEELEIVFEDEWLLVVNKP
AGMLSVPGKAEDRDSVYHRLKKKYPEATGPMIVHRLDMATSGLLLVAKTKEVHQDLQAQF
ANRSIKKRYVAVLDGIVLPERTGNTGRIELPLCLNPLDRPRQMVSSEHGKEAITEYQIIS
ESERITSASENTFNESNRIDESERSINESRKYTRIVFYPLTGRTHQLRVHAAHPEGLGCP
ILGDELYGKKADRLYLHAEYIEFRHPIYGDILCIQKEADF
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgatacattttttcaagaaacccatttctcaccttgcgttgccggagaaattcacttat
cctttccattatacacctcatccattgtgtgtattggctgcggaagaagtgaaagaatat
attgcaaaccggaaagaatggcaagaggagttggcttccggaaagatgtttggagtgttg
attgtgcaaacggacaatggaataacaaacaacgaagaaaatcaaattggttatcttgca
gctttctccggcaatctggccggaaagaatctgcatccttatttcgttcctcctgtttat
gacctattacaaccggagggattcttcaaaatcgaagaagaacagatttctgccattaat
atccgtattcgtgaattggaaaacagtagttcttatctcggttcaaaagagaaatggaag
atagaaacgaaacatgctaaagctgttttgaatcaagcaaaagcggagcttaaaatggca
aagaaggcgagagagattcgccgccagtcatctccggagctttccgaagaagaacaagcc
tccctgattcgggaaagccaataccaaaaggcggaatacaaacgactggaaaaggaatgg
aagaaacgattggaagagctcgaaacggaagtcaggcacttcgatattgaaatagaacga
ctgaaaaccgaacgaaaagaacgttcggcagctttacaaagaaaattattcgagcagttc
cggatgctaaacgcccaaggagaagtgaaagacttatatactattttcgagcaaacggtt
cagaaagttcctcctgccggtgcgggtgaatgtgctttgcctaagttattgcaatatgcg
tatcttcatcaattaaagccattggctatggctgaattctggtggggcgactctcctaaa
aacgaaatccggcatcacggatattattatccttcctgcaaaggaaagtgcgaaccgatt
ctgcaacacatgttgcaaggattggaggtagacgaaaatccactgctgaatcctgttcat
gaagaggaagaactggaaatcgtgtttgaggatgaatggttgctggtagtcaataaaccg
gcaggaatgttgtccgttccgggaaaagcagaggacagagattcagtctatcatcgtttg
aagaagaagtatcccgaagctaccggtcctatgattgtacatcggctcgatatggctact
tcaggattattgctcgttgccaaaacaaaagaagtacatcaggatttacaggcacaattt
gcaaacagaagtatcaagaaacgctatgtggctgtgctggatggaatagtactaccagaa
agaacaggaaatacaggaagaatcgaactccctctttgtctgaatcctctcgaccgccct
cggcaaatggttagtagcgaacacgggaaagaagcgattacagaatatcagatcatcagt
gagtctgaaagaattaccagtgcatctgaaaacactttcaacgaatcaaacaggattgat
gaatcagaaaggagtatcaatgagtcaagaaaatacacccggattgtcttctatccattg
accggacgcacacatcagttacgagtacacgccgcccatccggaaggcttgggatgcccc
atacttggagacgaactctacggaaagaaagcagacagactatacctccatgccgaatat
atagagttccgccatcccatatacggagacattctctgcatacagaaagaggccgatttc
taa
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