Bacteroides caecimuris: A4V03_08655
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Entry
A4V03_08655 CDS
T05202
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bcae
Bacteroides caecimuris
Pathway
bcae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4V03_08655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcae03019
]
A4V03_08655
Enzymes [BR:
bcae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A4V03_08655
Messenger RNA biogenesis [BR:
bcae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A4V03_08655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Utp25_C
AAA_7
SMC_N
AAA_19
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ANU57629
UniProt:
A0A1C7GZE0
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All DBs
Position
2070830..2072092
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AA seq
420 aa
AA seq
DB search
MKFSELQLNANVLEALDAMRFDECTPIQEQAIPIILEGKDLIAVAQTGTGKTAAFLLPVL
NKLSEGQHPEDAINCVIMSPTRELAQQIDQQMEGFSYFMPVSSVAVYGGNDGILFEQQKK
GLTLGADVVIATPGRLIAHLSLGYVDLSKVSYFILDEADRMLDMGFYEDIMQIVKYLPKE
RQTIMFSATMPTKIQQLANTILNDPSEIKLAVSKPAEKIIQAAYVCYENQKLGIIRSLFM
DEVPERVIIFASSKIKVKEVAKALKSMKLNVGEMHSDLEQAQRETVMHEFKAGRINILVA
TDIVARGIDIDDIRLVINFDVPHDSEDYVHRIGRTARANNDGVALTFINEKEQSNFKSIE
NFLEKEIYKIPIPEELGEAPEYKPRSFNKNRNRNFSKRKDFRGKRNNGGKKSNYSAPRQK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttccgaactacaattaaatgcaaatgtacttgaggcgcttgatgccatgcga
tttgacgaatgtacgcctatacaagaacaagcaattccaatcatactcgagggtaaagat
ttgatcgcagtagcacagacagggacaggtaaaacagcagcgtttctgcttcctgtattg
aacaaattatctgaaggtcaacatccggaggatgcgattaattgtgtcatcatgtctcct
acccgggaattagctcaacagattgaccagcaaatggaaggtttttcctatttcatgccg
gtatcgagcgttgctgtatatggcggaaatgacgggatattgttcgaacaacagaaaaag
ggactcacattgggagctgacgttgtcattgctactcccggacgtctgatcgcccattta
agccttggatatgtagatctttccaaggtttcttattttattttagatgaagcagaccgg
atgctcgacatgggattctacgaagatatcatgcaaatagtcaaatatctgccgaaggaa
cgacagactatcatgttttcagcaacaatgccgacaaagatacagcaattggcaaatacg
atcttaaacgatccgtcggaaataaagctcgcagtttccaaacctgccgaaaagattatt
caggcggcatacgtctgctatgaaaatcaaaagctgggcatcatacgcagtctttttatg
gatgaggtcccggaacgtgtgattatctttgcttcttccaaaatcaaggttaaagaagtt
gccaaggcattgaaatcaatgaaactgaacgtaggtgagatgcattcggacttggaacag
gctcaacgggaaacggttatgcacgagtttaaagccggacgaatcaatatattagtagct
acggacatcgttgcacgtggtatcgacatcgatgatatccgcttggttatcaacttcgac
gtgcctcacgacagcgaggactatgtgcaccgcatcggtcgtacagcacgtgccaacaat
gacggggtggcacttacgtttatcaacgaaaaggaacagagtaacttcaaaagcattgag
aatttcctggagaaagagatttataagattcccatccctgaagaattgggagaggctcca
gaatacaaaccgcgttcgttcaacaaaaacaggaataggaatttctctaaaagaaaagat
ttccgaggaaaaagaaacaacggagggaagaaaagcaactactctgcgcccagacaaaaa
tag
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