Bacteroides caecimuris: A4V03_14100
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Entry
A4V03_14100 CDS
T05202
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bcae
Bacteroides caecimuris
Pathway
bcae03030
DNA replication
bcae03430
Mismatch repair
bcae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A4V03_14100
03430 Mismatch repair
A4V03_14100
03440 Homologous recombination
A4V03_14100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcae03032
]
A4V03_14100
03400 DNA repair and recombination proteins [BR:
bcae03400
]
A4V03_14100
Enzymes [BR:
bcae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A4V03_14100
DNA replication proteins [BR:
bcae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A4V03_14100
DNA repair and recombination proteins [BR:
bcae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A4V03_14100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF6282
Motif
Other DBs
NCBI-ProteinID:
ANU58568
UniProt:
A0A1C7H0Z5
LinkDB
All DBs
Position
complement(3311294..3315100)
Genome browser
AA seq
1268 aa
AA seq
DB search
MQDFVHLHVHTQYSLLDGQASVARLVDKAMKNGMKGIAVTDHGNMFGIKEFTNYVNKKNS
GPKGEVKDLKKRIAGIEAGTIECEDKEAEIAACKAKIVEAENKLFKPVIGCEMYVARRTM
DLKEGKPDQSGYHLIVLAKNEKGYHNLIKLVSHAWTRGYYMRPRTDRSELEKYHEGLIVC
SACLGGEIPKRITAGQFAEAEEAIQWYKNLFGDDFYLEMQRHKATVPRANHECYPLQVNV
NKYLMEYAQKFNIKLICTNDVHFVDEENAEAHDRLICLSTGKDLDDPSRMLYTKQEWMKT
REEMNELFADVPEALSNTLEILDKVEYYSIDHAPIMPTFAIPEDFGTEEGYRAKYTEKDL
YDEFTQDEHGNVVLSEEEGKAKIKRLGGYDKLYRIKLEGDYLAKLAFDGARRIYGEPLSE
EVKERMNFELYIMKTMGFPGYFLIVQDFINAARKELGVSVGPGRGSAAGSAVAYCLGITK
IDPIQYDLLFERFLNPDRISLPDIDVDFDDDGRGEVLRWVTNKYGQEKVAHIITYGTMAT
KLAIKDVARVQKLPLSESDRLAKLVPDKIPDKKLNLRNAIEYVPELQAAEASSDPLVRDT
IKYAKMLEGNVRGTGVHACGTIICRDDITDWVPVSTADDKETGEKMLVTQYEGSVIEDTG
LIKMDFLGLKTLSIIKEAVENIRLSRNVEVDVDAIDICDPATYKLYSDGRTIGTFQFESA
GMQKYLRELQPSTFEDLIAMNALYRPGPMDYIPDFIDRKHGRKPIEYDIPVMEKYLKDTY
GITVYQEQVMLLSRLLADFTRGESDALRKAMGKKLRDKLDHMKPKFIEGGRKNGHDPKVL
EKIWTDWEKFASYAFNKSHATCYSWVAYQTAYLKANYPPEYMAAVMSRSLSNITDITKLM
DECKAMGIQTLGPDVNESNLKFTVNHDGNIRFGLGAVKGVGEAAVHSIMEERSKNGPFLG
IFDFVQRVNLNACNKKNMECLALAGGFDSFPELKREQYFAVNSKGEVFLETLMRYGNRYQ
ADKAAAVNSLFGGENVIDVATPEIPQGVERWSDLDRLNRERDLVGIYLSAHPLDEFSIVL
EHVCNTRMADLEDKAALVGREITMGGIVTSVRRGVSKNGNPYGIAKIEDYSGSTEIPFWG
NDWVTYQGYLNEGTFLYIKARCQAKQWRQDELEVKITSMELLPDVKEGLVQKITIIIPLS
VLNSALVTELATLTKEHPGNTELYFKVTDDADVSHMSIDLISRPIKLSVGRDLITYLKER
PELGFHIN
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatttcgttcatttacatgtccatacccagtattctctcttggatggtcaggca
agcgtggctcgtctggtcgataaggcgatgaagaatggaatgaagggtattgccgtgacc
gatcatgggaatatgttcggtatcaaggaatttacgaactacgtcaataagaagaatagc
ggtccgaaaggtgaagtcaaggacttgaaaaagcggatagcgggaattgaagccggtacc
atagagtgtgaggacaaagaagcggagattgccgcttgcaaagccaagatagtggaagcg
gaaaacaaacttttcaaacccgtcatcggttgtgaaatgtatgtggcgcgccgcacaatg
gatttgaaagaaggaaagccggaccaaagcggttatcacttgattgtattggctaagaac
gaaaaaggctatcataaccttattaaattagtatcgcacgcgtggacgcgcggatattat
atgcgtccgcgtacggaccgcagcgaactcgaaaagtatcatgaaggactgattgtctgc
tccgcctgcctcggtggtgagataccaaaacggattactgccggacaatttgcggaagct
gaagaagctatacaatggtataagaacttgtttggtgatgatttctatcttgagatgcag
cgccataaggcaactgttccccgtgccaatcacgaatgttacccattgcaggtgaatgtg
aacaaatacctgatggaatatgctcagaagttcaacatcaagctgatttgtacgaacgac
gtccactttgtggatgaagagaatgccgaagcgcacgaccgcctgatttgtttgagcacc
ggtaaggacctggatgatccaagccgtatgctttacaccaaacaggaatggatgaaaaca
cgggaggagatgaatgaactctttgccgatgtgccggaagccttgagcaatacgttggaa
atcctcgacaaagtagaatattactccatcgaccatgcgcctatcatgcctactttcgct
attcccgaagactttgggacggaagagggatatagggctaaatatacggaaaaggacctt
tatgatgagtttacccaagatgagcatggtaatgtggtgttgagtgaagaagaagggaag
gcaaaaatcaaacgcttgggtggctatgataaactctatcgtattaaacttgaaggagat
tacttggcgaaactagcttttgacggagccagaagaatttatggtgaacctctgtccgaa
gaagttaaagagcggatgaacttcgaactgtatatcatgaaaacaatgggtttcccagga
tacttcttgattgtacaggacttcatcaatgcggcacgtaaggaattgggtgtgtcggtc
ggtccgggacgtggttcggctgccggttcggcagtggcttattgtctgggaattacgaaa
atcgaccctatccagtacgatttgctgtttgagcgtttcttgaatccggaccgtatctcc
ttgcccgatatcgatgtggattttgatgatgacggtcgtggagaggtacttcgttgggta
acgaataaatatggtcaggaaaaagtagctcatatcatcacttatggtacaatggctact
aagttggctatcaaggatgttgcccgtgtgcaaaagctgcctctatcggagtctgaccga
ctggctaaattagtgccggataagattcctgataagaaactgaacttgcggaatgcgatt
gaatatgttcccgaactacaagctgcggaagcatcatccgatccgttggtacgggatacg
atcaagtacgctaagatgctcgaaggtaacgtacgtggtacaggtgtacatgcttgtggt
acgattatctgtcgtgacgatatcaccgactgggtacctgtcagcactgctgatgataag
gaaacgggcgaaaaaatgcttgttacccagtatgaaggttcggtgattgaagataccgga
ttgattaagatggacttccttggtctgaaaactttgtctattatcaaagaggccgttgaa
aatatccgtttaagccgtaatgttgaagtagacgtcgatgcgatagacatctgcgatccg
gctacttataaattatatagtgacggacggacgattggtacattccagtttgaatctgcc
ggcatgcagaaatatctgcgcgaattgcagccttctacattcgaagatttgattgccatg
aatgccctttatcgtccgggaccgatggattatatacctgattttatcgaccgtaaacat
gggcgtaagccgattgagtatgatattccggtaatggaaaaatacttgaaggatacgtat
ggtataacggtttatcaggaacaggtgatgcttctgtcgcgcttattggcggactttacc
cgcggtgagtctgatgcactccgtaaagcgatgggtaagaagttgcgtgacaagctagac
cacatgaaacctaaatttattgaaggtggacgaaagaacggacacgacccgaaagttctt
gaaaaaatctggaccgactgggaaaagtttgcgtcatacgctttcaataaatcacatgct
acttgttattcgtgggtagcttaccaaacagcttatctaaaagctaattatcctcctgaa
tatatggctgctgtgatgagccgaagcttgtcgaacattaccgatattacgaaattgatg
gacgaatgtaaggcaatgggtattcagacgctggggccagatgtaaacgaaagtaacctg
aagtttacagtaaaccatgatggtaatatccgtttcggactaggggctgtcaaaggtgta
ggtgaagctgccgtccatagcattatggaggaacgtagtaagaatggtcctttcctcggt
atattcgactttgtgcaacgtgtcaacctgaatgcctgcaacaagaagaatatggagtgt
ctggcattagccggagggtttgatagtttccctgaactgaagcgggagcaatattttgct
gtaaattctaagggtgaagtatttctggaaacattgatgcgctatggtaaccgctatcag
gcagataaggcagctgctgtcaattctttgttcggtggtgaaaacgttattgatgttgca
actcctgaaattcctcaaggtgtagaacgttggagtgatctcgatcgtctgaatcgtgag
cgtgatttggtaggtatctatctttctgctcatccgttggatgaattttctatcgtattg
gaacatgtctgcaatacacggatggcggatttggaagataaagctgcacttgttggtcgt
gaaataacgatgggagggattgtgactagtgttcgtcgcggagtcagcaagaatggaaat
ccgtatggtattgctaagattgaagattattccggttctaccgaaatcccattctgggga
aatgactgggtgacttatcagggatatctcaacgaaggaacgttcctatatattaaagcc
cgttgccaagcgaaacaatggcgacaggatgaattggaagtgaaaatcacttctatggaa
cttcttcccgatgtgaaagaaggactggtgcagaagatcacgattatcattcctctgtca
gtcttgaactcggctttggttacagagcttgccactctgaccaaggaacatccgggaaat
acggaattgtattttaaagtgacggatgatgccgatgtaagccacatgtcaattgatttg
atttcccgtccgatcaagctttcagtggggcgggatttaataacatatttaaaggaacgt
ccggaactgggatttcatataaattga
DBGET
integrated database retrieval system