Bacteroides caecimuris: A4V03_15665 Help Entry A4V03_15665       CDS       T05202                                  Name (GenBank) RNA polymerase sigma-54 factor   KO K03092   RNA polymerase sigma-54 factor Organism bcae  Bacteroides caecimuris Pathway bcae02020   Two-component system bcae02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:bcae00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     A4V03_15665  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     A4V03_15665  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:bcae03021]     A4V03_15665 Transcription machinery [BR:bcae03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      A4V03_15665 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_CBD Sigma54_DBD Sigma54_AID HTH_12 LacI Motif Other DBs NCBI-ProteinID:  ANU58823 UniProt:  A0A1C7H264 LinkDB All DBs Position complement(3714960..3716444) Genome browser AA seq 494 aa AA seqDB search MAQGSRQIQSQAQQQVQTLSPQQILVVKLLELPAVELEDRIHAELLENPALEEGKEENAA DEYADSDITEDGMDSDTNDYDSLSDYLNEDDIPDYKLQENNRSKDEQAEDIPFSDSTSFY EILKEQLRERNLTEHQSDLVEYLIGSLDDDGLLRKSLESICDELAIYAGIESTEEELEEA LCILQDFDPAGIGARSLQECLLIQICRKKDEEKKPNPILELEERIIRECYEEFTRKHWEK IIKKLDIDEETFQEALNEITKLNPRPGASLGETIGRNLQQIVPDFIVETYDDGTINVSLN NRNVPELRMSRDFTEMVEEHTKNRANQSKESKEAMMFLKQKMDAAQGFIDAVRQRQNTLM TTMQAIIDLQRPFFLEGDESLLKPMILKDVAERTGLDISTISRVSNSKYVQTNYGIYPLK FFFSDGYTTEDGEEMSVREIRKILKECIDGEDKKKPLTDDELADILKEKGYPIARRTVAK YRQQLNIPVARLRK NT seq 1485 nt NT seq  +upstreamnt  +downstreamnt atggcacaaggttcccgtcaaatacaatctcaggcgcaacagcaggtacaaacgctttcg cctcagcagattctggtcgtgaaactgttggagcttcccgcagtagagctggaagaccgt atccatgctgaactgcttgaaaatccggcacttgaagaaggtaaagaagaaaacgctgcg gatgagtatgctgattccgacattacagaagatggcatggatagcgataccaacgattat gattctttgagtgattatctgaatgaagacgatattcccgattataaattacaagagaac aaccgttcgaaagatgaacaggcggaggatatcccgttctctgattccacctctttttat gaaattctgaaagaacagttgcgtgaacgcaacctgaccgaacatcagagtgatctggtg gaatatctgatcggttcattggacgacgacggactgctccgtaagtcattggagagcatc tgtgatgaactggcaatttatgccggtatcgaatcgacagaagaagaactggaagaagca ctctgtatcttgcaggattttgatcccgctggtatcggtgcccgcagccttcaggaatgt ctgttgatacagatttgccggaagaaggatgaagagaagaagcccaacccgatactggag ctggaagaacgtatcatcagagagtgttatgaagaattcacccgtaaacattgggagaag attataaagaaactggacattgatgaagaaactttccaggaagctcttaatgagataacc aagctgaatccccgtccgggtgcttctttgggagaaacgattggcaggaatcttcaacag atagttcccgactttatcgtggaaacgtatgatgacggaaccatcaatgtaagcctcaat aaccgtaatgttcccgaacttcgtatgagtcgcgacttcacggaaatggtggaagagcat accaaaaacagggctaatcaatcaaaagaatccaaagaagcgatgatgttcctgaagcag aaaatggatgcggcacaaggatttatcgatgctgtgcggcagcgtcagaataccctgatg actaccatgcaggctatcattgacttacaacgtcctttcttcttggaaggagacgaatca ctgttgaaaccgatgattttgaaagatgtggctgaacgtaccggactggacatttcaacg atctcccgcgtgagcaacagtaaatatgtgcagacaaattacggcatctatccgctcaaa ttctttttcagcgacgggtataccacagaggacggcgaagaaatgtctgtccgtgagata cgcaagattctgaaagagtgtattgacggggaggacaaaaagaaaccgctgacagatgat gaattggcagacatcttgaaagagaaaggttatcccattgctcgtagaacggtagccaaa taccgtcagcagttgaatattccggttgcgcgacttcgaaaataa

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