Bacteroides caecimuris: A4V03_15740
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Entry
A4V03_15740 CDS
T05202
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bcae
Bacteroides caecimuris
Pathway
bcae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4V03_15740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcae03019
]
A4V03_15740
03016 Transfer RNA biogenesis [BR:
bcae03016
]
A4V03_15740
Enzymes [BR:
bcae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A4V03_15740
Messenger RNA biogenesis [BR:
bcae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A4V03_15740
Transfer RNA biogenesis [BR:
bcae03016
]
Prokaryotic type
tRNA degradation factors
A4V03_15740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
MazE_antitoxin
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ANU58837
UniProt:
A0A1C7H5L2
LinkDB
All DBs
Position
complement(3734181..3736307)
Genome browser
AA seq
708 aa
AA seq
DB search
MINPIVKTIELPDGRTITLETGKLAKQADGSVMLRMGNTMLLATVCAAKDAVPGTDFMPL
QVEYKEKFAAFGRFPGGFTKREGRASDYEILTCRLVDRALRPLFPDNYHAEVYVNIILFS
ADGVDMPDALAGLAASAALAVSDIPFNGPISEVRVARVDGQFVINPTFEQLEKADMDLMV
AATYENIMMVEGEMHEVSEAELLEAMKVAHEAIKIHCKAQMELTEEVGKTVKREYNHEVN
DEDLRKAVHEACYDKAYAVAASGNNNKHERFAAFEAIREEFKAQFSEEELDEKAALIDRY
YHDVEKEAMRRSILDEGKRLDGRKTTEIRPIWCEVSPLPGPHGSAIFTRGETQSLTSVTL
GTKLDEKIIDDVLEHGKERFLLHYNFPPFSTGEAKAQRGVGRREIGHGHLAWRALKGQIP
ADYPYVVRVVSDILESNGSSSMATVCAGTLALMDAGVKIKKPVSGIAMGLIKNPGEEKYA
VLSDILGDEDHLGDMDFKVTGTKDGITATQMDIKVDGLSYDILERALNQAKEGRMHILNK
ITETIAEPRADLKEHAPRIETMTIPKEFIGAVIGPGGKIIQGMQEETGAVITIEEIDGMG
RIEVSGTNKKCIDDAMRMIKAIVAVPEVGEVYKGKVRSIMPYGAFIEFLPGKDGLLHISE
IDWKRLETVEEAGIKEGDEIEVKLIDIDPKTGKFKLSRKVLLPRPEKK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgattaacccaattgttaagacaatcgagttacctgatggaagaaccatcacactcgag
acgggaaagttggcaaaacaggcagacggttctgtaatgcttcgcatgggcaacaccatg
ttgttagctactgtttgtgccgctaaagatgcagttcccggaacagattttatgccttta
caggtagagtacaaagaaaaatttgcggcattcggccgtttccctggtggtttcaccaag
cgagaaggtagggcttctgattatgagattcttacttgccgtcttgtcgaccgtgctctc
cgtcctttattccccgataattatcacgcagaggtatatgtgaacatcatcctcttttct
gctgatggtgtagacatgccggatgcattggcaggacttgccgcttctgcagcacttgcc
gtttcagatattcctttcaacggaccgatctctgaagtacgtgtagcacgtgttgacggt
cagttcgttatcaatcctacttttgaacaactggaaaaagctgacatggacttgatggta
gccgctacttatgagaacatcatgatggtagaaggtgaaatgcatgaagtatccgaagct
gaattgctggaagcaatgaaggtagctcacgaagctatcaagattcattgcaaagcgcag
atggaattgactgaagaggttggtaaaactgtaaaacgcgaatacaaccacgaagtaaac
gacgaagacttgcgcaaggctgttcatgaagcatgttacgacaaggcttacgcagttgcc
gcttccggaaacaataacaaacacgaacgttttgctgctttcgaagcaatccgcgaagaa
ttcaaagctcaattctctgaagaagagttggacgaaaaggctgcattgatcgaccgttac
taccacgatgtagaaaaagaagccatgcgccgttctattttggacgaaggtaagcgtctg
gatggtcgtaagactactgaaatccgtccgatctggtgtgaggttagtcctctgcctggc
cctcacggatctgctatctttactcgtggtgaaacacagtcattgacttctgttactctg
ggtacaaaactggatgagaagattatcgacgatgttttggaacacggaaaagaacgtttc
ttgttacactataacttccctcctttctctacaggcgaagcaaaagcacaacgtggtgta
ggtcgtcgtgaaatcggtcacggtcacttggcttggcgtgctttgaaaggacagattcct
gctgattatccgtatgtagtacgtgtggtttcagatatcctcgaatctaacggttcttct
tctatggctaccgtatgtgccggcacattggcattgatggatgcaggtgtgaagatcaag
aaaccggtatcgggtatcgctatgggattgattaagaatccgggcgaagaaaaatatgct
gtattgtctgatatcctgggtgacgaagaccatttgggagatatggacttcaaggtgacc
ggaacaaaagacggtatcactgctacacagatggatatcaaggtagacggtctgtcttac
gacattttggaacgtgctttgaaccaggctaaagaaggacgtatgcatatccttaataag
attactgaaacaattgccgaaccacgtgccgacctgaaagaacatgctccacgtatcgaa
acgatgacaattcctaaagaattcatcggtgctgtgatcggccctggtggaaagatcatc
caaggtatgcaggaagaaactggtgctgtgattactatcgaagaaattgatggtatggga
cgcatcgaagtttccggaacaaacaagaaatgtattgatgatgcaatgcgcatgattaaa
gcaatcgttgctgttcctgaagtaggcgaagtttataaaggtaaagttcgttctattatg
ccttatggtgcatttatcgaattcttgccgggcaaggatggtttgctgcacatctccgaa
attgactggaaacgtctggaaacagtagaagaagccggaatcaaagaaggtgatgaaatc
gaagtaaaactgattgatattgatccgaaaactggtaaattcaaactttcaagaaaagtt
ttgttgccaaggccggaaaagaagtaa
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