KEGG   Bacteroides caecimuris: A4V03_16820
Entry
A4V03_16820       CDS       T05202                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bcae  Bacteroides caecimuris
Pathway
bcae02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bcae00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    A4V03_16820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bcae03021]
    A4V03_16820
Transcription machinery [BR:bcae03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     A4V03_16820
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 GerE Sigma70_r4 Sigma70_ECF DUF722 HTH_24 Soyouz_module WHD_MCM3_C HTH_38
Other DBs
NCBI-ProteinID: ANU59005
UniProt: A0A1C7H306
LinkDB
Position
complement(3943033..3943614)
AA seq 193 aa
MSQKYSQDEAQALVKALKEGNQLAFSIVYKTYAAQTFSLAFKYLLNKELAEDAVQNLFLK
LWLKKEEIDETKPINRYLFTMLKNDLLNTLRDSKKNIYLLEDCLSMVLELEDNSQNENLK
QEQMNIIQQALEQLSPQRRKVFEMKVSGKYSNQEIADKLNLSINTIKFQYSQSLKQIRAT
VGELSLLLLYCMM
NT seq 582 nt   +upstreamnt  +downstreamnt
atgtcccagaaatactcacaggatgaagcccaagctttggttaaggctctgaaagagggg
aaccagctggcatttagtattgtatacaagacgtatgcggcgcagaccttttctttggca
tttaaatatttgctgaataaggaattggctgaagatgctgtgcagaacttattcttaaaa
ctctggctgaaaaaagaagagatcgacgaaacaaaacccataaacagatacctttttacg
atgttgaagaacgatctgctcaatacgttgagagactcaaagaaaaatatctatttactt
gaggattgcctttcaatggttttggaattggaagacaattctcaaaacgaaaaccttaaa
caagaacaaatgaacatcatacagcaagctcttgagcaactttcgccgcaacgccgcaag
gtttttgaaatgaaagtttcgggaaaatactccaatcaggaaatagccgataaacttaat
ctttcgatcaatacaattaaatttcaatatagccaatctttgaagcagattcgcgcgaca
gtgggagagcttagcctattgttgctttattgtatgatgtag

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