Bacteroides caecimuris: A4V03_18715
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Entry
A4V03_18715 CDS
T05202
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
bcae
Bacteroides caecimuris
Pathway
bcae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A4V03_18715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcae03400
]
A4V03_18715
Enzymes [BR:
bcae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4V03_18715
DNA repair and recombination proteins [BR:
bcae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A4V03_18715
RecFOR pathway proteins
A4V03_18715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
AAA_22
AAA_16
Mg_chelatase
TIP49
nSTAND3
TsaE
AAA_14
NB-ARC
AAA_18
Rad17
AAA_PrkA
NTPase_1
RNA_helicase
NPHP3_N
AAA_28
ABC_tran
AAA_33
AAA_17
bpMoxR
AAA_24
DUF815
Sigma54_activ_2
NACHT
Motif
Other DBs
NCBI-ProteinID:
ANU59347
UniProt:
A0A1C7H6Z1
LinkDB
All DBs
Position
4436742..4437776
Genome browser
AA seq
344 aa
AA seq
DB search
MEQEDFNIREHQLTSKERDFENALRPLSFEDFSGQDKVVENLRIFVKAARLRGEALDHVL
LHGPPGLGKTTLSNIIANELGVGFKVTSGPVLDKPGDLAGVLTSLEPNDVLFIDEIHRLS
PVVEEYLYSAMEDYRIDIMIDKGPSARSIQIDLNPFTLVGATTRSGLLTAPLRARFGINL
HLEYYDDDILSNIIRRSSSILDVPCSVRAASEIASRSRGTPRIANALLRRVRDFAQVKGT
GSIDTEIAQFALEALNIDKYGLDEIDNKILCTIIDKFKGGPVGITTIATALGEDAGTIEE
VYEPFLIKEGFMKRTPRGREVTELAYKHLGRSLYSGNQKTLFND
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggaagattttaacatacgcgaacatcagcttacttcaaaagaacgggatttc
gagaatgcactccgtccgttgagctttgaagactttagcggacaggataaggtggtggag
aacctccgcatttttgtgaaggcggcacgcctgcgtggcgaggcgctcgaccatgtcctg
cttcacggccctcccggcttgggaaaaacaaccctttcaaatattatcgccaatgaattg
ggtgtcggctttaaggtaacctccggtccggtgctcgacaaaccgggcgacttggcaggt
gtgctgaccagtctcgaaccgaatgatgtgctctttatagatgaaatccatcgtctgtcg
cctgtagtggaagagtatctttactctgccatggaagattaccgcattgatattatgatt
gataagggaccttcggcacgtagcattcagattgatttgaatcctttcacactggtgggg
gctactacacgtagcggtctgctgacagccccgcttcgtgcacgttttggtataaacctt
catttggagtattatgatgatgatatcttgagcaatatcatccgccgttcttcatccata
ctggatgtgccttgttcggtacgtgcagcctcggagattgcatcccgcagtcgcgggacg
ccccgtattgccaatgctctgctccgccgggtacgtgacttcgcacaagtgaaaggcact
ggctctattgatacggagattgcccagtttgcgctggaggcattgaatatcgacaagtac
ggactggatgagatagacaacaagatactttgtaccattatagacaagtttaaaggcggt
cctgtcggtataacgaccattgctacagctttgggagaagatgcgggaaccattgaggaa
gtttacgaacctttcctgatcaaagaaggattcatgaaacgtactccccgcggacgtgag
gtgacagaacttgcctataagcatttggggcgtagcctgtatagtggcaatcaaaaaacg
ttgtttaacgattaa
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