Borreliella californiensis: QIA17_02765
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Entry
QIA17_02765 CDS
T09333
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bcaf
Borreliella californiensis
Pathway
bcaf02020
Two-component system
bcaf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bcaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QIA17_02765 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QIA17_02765 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcaf03021
]
QIA17_02765 (rpoN)
Transcription machinery [BR:
bcaf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QIA17_02765 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
MarR
HTH_36
HTH_11
Motif
Other DBs
NCBI-ProteinID:
WKC91731
LinkDB
All DBs
Position
complement(470265..471524)
Genome browser
AA seq
419 aa
AA seq
DB search
MIKQKLKLSQNLNSIQIQTIKILSLNQKELTKLILDESENNKCLEIDSNKIFFETLKTYR
FKKVFYKEDNIIKNQHDIALEKTQTNTSLKEHLLLQLRIQRINEDELKIGEILINNLNSK
GFHIINPYDLFKKEEKVKVKKIIELIQKFDPIGICVPNIIESLILQAKHHKLETNIIKIL
EKAELLEKTQEKLKEELKIRSKEFNTALEIIRQKLNPNPTLEFKDIDDTNFYVDPDILII
NHNNKFKIKIKEVSIFKKELKKTPENPQKQKQAKWLIESLRYRDEILAKIGIAIYTLQKE
FLRRGFKSLRPMNLSILSEKISVSKSTISRAIKNKYLKCEWGTILIKELFSSVGGAKTNE
FSKLSIKITVKKLLEANKKMSDEAISAILKSKGISISRRTVNKYRNELKSEKGRTYYGT
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacaaaaattaaaattatcccaaaatttaaactcaattcaaatacaaacaata
aaaatattaagccttaatcaaaaagaattaactaagcttatactagacgaaagcgaaaac
aataaatgcctagaaatagactcaaataaaatattttttgaaacattaaaaacatatagg
tttaaaaaagttttttacaaagaagataatattataaaaaatcaacacgacatagctctt
gaaaaaacacaaacaaatacttctttaaaagaacaccttttactacaattaagaattcaa
agaataaatgaagatgaacttaaaataggggaaatactaataaacaatctaaacagcaaa
ggttttcatataataaatccttacgatctttttaaaaaggaagaaaaagtaaaagtaaaa
aaaataattgaacttattcaaaaatttgatccaattggaatttgtgtccccaacataata
gaatcgttaattttgcaagcaaagcatcataaattagaaactaatattattaaaattctt
gaaaaagcagagcttcttgaaaaaactcaagaaaagttaaaagaggagcttaaaataaga
agcaaagaatttaatacagctttagaaattatcagacaaaaacttaaccccaacccaaca
ctcgaatttaaagatatagacgacactaatttctatgtcgatccagatatattaataatt
aatcacaataataaatttaaaattaaaatcaaagaagttagtatctttaaaaaagaactt
aaaaagacacctgaaaatccccaaaaacaaaaacaagcaaagtggttaatcgaatcccta
cgatatagagacgaaatacttgcaaaaataggaatagctatatatacattgcaaaaagaa
tttctaagaagagggtttaaaagcttaaggccaatgaacctgagcattctgtcagaaaaa
attagtgtatcaaaatcaacaatatcaagagcaataaaaaataaatacttaaaatgcgag
tggggtacaatattaatcaaagaactttttagctctgttggtggagcaaaaacaaatgaa
ttttcaaaattaagcattaaaataacagtaaaaaagttattagaagcaaataaaaagatg
tcagatgaagcgatttctgctatactgaaatccaaaggaatctctatttctagaagaaca
gtgaacaaatatagaaatgaattaaaatctgagaaagggagaacatattatggaacctaa
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