Paraburkholderia caribensis: K788_0000002
Help
Entry
K788_0000002 CDS
T04141
Name
(GenBank) Transcriptional regulator GabR of GABA utilization
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
bcai
Paraburkholderia caribensis
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcai03000
]
K788_0000002
Transcription factors [BR:
bcai03000
]
Prokaryotic type
Helix-turn-helix
GntR family
K788_0000002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_Crp_2
Fe_dep_repress
Rrf2
Motif
Other DBs
NCBI-ProteinID:
ALL69002
UniProt:
A0A0P0RJV2
LinkDB
All DBs
Position
2:2952018..2953574
Genome browser
AA seq
518 aa
AA seq
DB search
MRASVLSDWLAQRLDRGNGLPIYRQLHRLLQQAILTRELPAGSKVPSSRLLANELGIARN
TVTQVYEQLALEGYVTSATGRGTFVADTSPDEIVGSTDGQTAPVSAPVQQLQQALLPTHS
KSPLHTQQPAARALSQRGSRLIAGAGVSKRQWGAFMPGVPDVTRFPARVWSRLHNKYWRR
LRPDLLTYAPGGGLSLLRHALADYLRTSRSVRCTPEQIIITTGIHQSVDLAVRLLSDPGD
VIWTEDPCYWGVRSVMHVSGLKSRPISVDDEGINPSPDDLAHPPKLILVTPSHQYPLGMV
MSLARRRMLLEYARQNQCWIIEDDYDSEYRYGSRPLASLQGLDTAGQVIYVGSFGKTLFP
GLRIGYLVVPEALAESFATASAELYREGQLLQQAMLAEFIAEGHFTSHIRKMRTLYGQRR
STLLDAAARRYGDALPAVGGDAGLHLVMQLPEGTDDRAVAAAALERNIVVRALSGYYAQP
SRAQSGLLIGYACVPDEEIAPAFDTLADAIDATLPLFA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgagtgttttgtccgactggttggcccagcgtctggaccgcggcaacggtctg
ccgatctaccggcagctgcatcggctgctgcaacaggccattctgacgcgcgaactgccc
gctggcagcaaggtgccgtcgtcgcggctgctggccaacgaactgggcatcgcgcgcaat
accgtcacgcaggtttacgagcagcttgcgctggagggttatgtcacgtcggcgacgggg
cgtggcacattcgtcgccgatacgtcgccggatgagatcgtcggctcgacagatggacag
actgcgcctgtttccgcgcccgtgcagcagttgcagcaggcgttgctgccgacgcattcg
aagtcgccgctgcacacgcaacagcccgccgcgcgcgcgttgtcgcagcgcggctcgcgg
ctgatcgccggcgcgggcgtgtcgaagcggcaatggggcgcgttcatgccgggcgtgccc
gatgtcacgcgctttccggcgcgcgtctggagccgcttgcacaacaagtactggcggcgt
ctgcggcccgatctgctgacctacgcgcccggcggcggcctgtccttgctgcgccacgcg
ctggcggactatctgcgcacgtcgcgctcggtgcggtgcacgcccgagcagatcatcatc
acgacgggcattcaccaatccgtcgatctcgccgtgcgtctgctgtccgatcccggcgac
gttatctggacggaagacccgtgctattggggcgtgcgcagcgtcatgcacgtttcgggc
ctcaagtcgcgcccgatttccgtcgacgacgaaggcatcaatccatcgcccgacgatctc
gcgcatccgccgaagctgatcctcgtgacgccgtcgcaccagtacccgctcggcatggtg
atgagtctcgcgcgccggcgcatgctgctcgaatacgcgcggcagaaccagtgctggatc
atcgaggacgactacgacagcgagtaccgctacgggagccggccgcttgcttcgctgcaa
gggctcgatacggctgggcaggtgatttacgtaggcagcttcggcaagacgctgtttccg
ggactgcggatcggctatctcgtggtgcccgaggcgctggccgagagcttcgcgacggcg
agcgccgagctgtatcgggaagggcagttgctgcagcaggcgatgctcgcggagttcatc
gccgaggggcatttcacgtcgcacatccgcaagatgcgcacgctgtacgggcagcgccgc
tcgaccctgctcgatgccgccgcgcggcgttatggcgatgcattgccggctgtcggcggc
gacgcgggcctgcatctcgtgatgcaactgcccgaaggcacggacgaccgcgccgtggcg
gcggctgcgctcgagcgcaatattgtcgtgcgtgcgttgtccgggtattacgcgcaaccg
tcgcgggcgcagtcggggttgctgatcggctatgcgtgcgtgcccgacgaggagatcgcg
cccgcattcgacacgctcgccgatgcgatcgacgcgacgttgccgcttttcgcttga
DBGET
integrated database retrieval system
