Paraburkholderia caribensis: K788_0000298
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Entry
K788_0000298 CDS
T04141
Name
(GenBank) LysR family transcriptional regulator YdcI
KO
K02623
LysR family transcriptional regulator, pca operon transcriptional activator
Organism
bcai
Paraburkholderia caribensis
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcai03000
]
K788_0000298
Transcription factors [BR:
bcai03000
]
Prokaryotic type
Helix-turn-helix
LysR family
K788_0000298
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
P22_Cro
DUF5804
YdaS_toxin
Motif
Other DBs
NCBI-ProteinID:
ALL68679
UniProt:
A0A0P0RIT7
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All DBs
Position
2:2639316..2640446
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AA seq
376 aa
AA seq
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MQRSLADSRVKFRHLQCFLAVAQFGGVQKAAESLSITQPAVSKTVAELEEILGVRLFERG
RHGAVPTREGQLFMPHASACVSALRQGVDLLARVEGEAAATLDIGVLPTVATSLVPPVMR
LFGEQWPNAIVRLKTGSNTELLERLKAGAIEFAVGRLADPERMVGLTFEQLYSEPLVAVV
RAGHALASGPLSSATRLLEFSVVVPPYGTLIRQSAESLLRAWAVPPLSSFVEVLSVSVGR
ALALENDAVWFVPRSAIEYELAHGLLVPLPLPIAGTEEPVGLILRSDTQPTPVGRALIDA
VRKVARERLARHVQARAEDGRGKHPAKRRTKRDAGNDVKVDAGVDVERDASHGSTQRAAK
PRGDKASGTSRRKVHL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcagcctcgcggacagtcgcgtcaaattccggcatctgcagtgctttcttgcc
gtcgcgcagttcggcggcgtgcagaaagcggcggagagcctgtcgatcacgcaaccggcc
gtgtcgaagacggtggccgaactggaagaaattctcggcgtgcgcctgttcgagcgcggc
cggcatggcgccgtgccgacgcgcgaaggccagctcttcatgccgcatgccagcgcctgc
gtgagcgcgctgcgccagggcgtcgatctgctcgcgcgggtggaaggcgaggctgccgcg
acgctcgatatcggcgtgctgccgaccgtcgcgacgtcgctcgtgccgcccgtgatgcgc
ctgttcggcgagcagtggccgaacgcgatcgtgcggctcaagacgggttcgaacaccgaa
ctgctggagcgcctgaaggcgggcgcaatcgagttcgcggtcggcaggctggccgatccc
gagcgcatggtggggctgacgttcgagcagttgtatagcgagccgctcgtcgccgtggtg
cgcgcggggcatgcgctggcatcgggcccgttgtcgtccgccacgcgtttgctggagttt
tccgtcgtcgtgccgccgtacgggacgctgatccggcagtcggcggaaagcctgctgcgc
gcgtgggctgtgccgccgctgtcgtcgttcgtcgaggtgctgtcggtgtcggtggggcgc
gcgctcgcgctcgaaaacgatgccgtgtggtttgtgccgcgcagcgcaatcgagtacgaa
ctggcgcacggcttgctggtgccattgccgttgcccattgccggcacggaggaacccgtc
ggcctgattctgcgctcggacacgcagccgacgcccgtcggccgcgcgctgatcgatgcc
gtgcgcaaggtcgcgcgcgagcggctcgcgcgccatgtgcaggcgcgcgccgaagatggg
cggggcaagcacccggcgaagcgccgcacgaagcgcgacgccgggaatgacgtcaaagtt
gacgcgggtgttgacgtagagcgcgacgcgagccatggttcaacacagcgcgccgcgaag
ccacgaggggacaaagcctcgggaacgtcacgcaggaaggtgcatctttga
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