KEGG   Paraburkholderia caribensis: K788_0001369
Entry
K788_0001369      CDS       T04141                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
bcai  Paraburkholderia caribensis
Brite
KEGG Orthology (KO) [BR:bcai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bcai03032]
    K788_0001369
   03036 Chromosome and associated proteins [BR:bcai03036]
    K788_0001369
   03400 DNA repair and recombination proteins [BR:bcai03400]
    K788_0001369
DNA replication proteins [BR:bcai03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    K788_0001369
Chromosome and associated proteins [BR:bcai03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    K788_0001369
DNA repair and recombination proteins [BR:bcai03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      K788_0001369
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF937 DUF2267
Other DBs
NCBI-ProteinID: ALL70287
UniProt: A0A0P0RN50
LinkDB
Position
unnamed:948559..948837
AA seq 92 aa
MNKQELIDAVAASTGESKSSTGEIIDAVITAVTTAVTRGENVQLIGFGSFSTGARAERAG
RNPSTGETITIPAAKTVKFTAGKAFKDVVNAI
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaacaagcaggaactcatcgacgcagtggccgccagcacgggggagagcaagtccagc
actggcgaaatcattgatgccgtcatcacggctgttacgacagccgtcacgcgcggcgag
aacgtccagttgatcggctttggttcattctccactggtgcgcgtgctgagcgtgcgggc
cgcaacccttctacgggcgagacgattacgatccccgccgccaaaaccgtcaagttcaca
gcgggcaaagcgttcaaagacgtggtgaacgccatctga

DBGET integrated database retrieval system