Paraburkholderia caribensis: K788_0001369
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Entry
K788_0001369 CDS
T04141
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
bcai
Paraburkholderia caribensis
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcai03032
]
K788_0001369
03036 Chromosome and associated proteins [BR:
bcai03036
]
K788_0001369
03400 DNA repair and recombination proteins [BR:
bcai03400
]
K788_0001369
DNA replication proteins [BR:
bcai03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K788_0001369
Chromosome and associated proteins [BR:
bcai03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
K788_0001369
DNA repair and recombination proteins [BR:
bcai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
K788_0001369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF937
DUF2267
Motif
Other DBs
NCBI-ProteinID:
ALL70287
UniProt:
A0A0P0RN50
LinkDB
All DBs
Position
unnamed:948559..948837
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AA seq
92 aa
AA seq
DB search
MNKQELIDAVAASTGESKSSTGEIIDAVITAVTTAVTRGENVQLIGFGSFSTGARAERAG
RNPSTGETITIPAAKTVKFTAGKAFKDVVNAI
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaggaactcatcgacgcagtggccgccagcacgggggagagcaagtccagc
actggcgaaatcattgatgccgtcatcacggctgttacgacagccgtcacgcgcggcgag
aacgtccagttgatcggctttggttcattctccactggtgcgcgtgctgagcgtgcgggc
cgcaacccttctacgggcgagacgattacgatccccgccgccaaaaccgtcaagttcaca
gcgggcaaagcgttcaaagacgtggtgaacgccatctga
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