Paraburkholderia caribensis: K788_0001408
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Entry
K788_0001408 CDS
T04141
Name
(GenBank) Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
bcai
Paraburkholderia caribensis
Pathway
bcai02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K788_0001408
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bcai02000
]
K788_0001408
Transporters [BR:
bcai02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
K788_0001408
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ALL70250
UniProt:
A0A0P0RMS3
LinkDB
All DBs
Position
unnamed:complement(906400..908019)
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AA seq
539 aa
AA seq
DB search
MLHVFTRAIRRHHGERLVHHVLGFALTLLITLATPQGHAQTRGGTLNFVVTPEPTALVDL
ATTATNVLKVSPKVVEGLLDYDFRLQPKPSLATSWEVSDDSRKFIFHLRHGVKWHDGKPF
TSADVAYSIQTLRQVHPRAKTTFANVTDIAMPDPYTVVITLSKPAPWLLKAFSSSETPIV
PKHIYDNTDVLGNPADNAPIGTGPFRFVKWVRGSYIEYERNNDYWDTGKPYLDRIVVKVI
SDPAARTVAFEDGSVDLSGDSPVPLSDVQRLKGDPKLALETRGYEFQAGVARIEFNLDNP
ALKNLNVRQAIASALDREVIRKVIYYGYATPLASPIIPSSPYYDPTPTPYPFNVERANAL
LDEAGYPRKADGTRFALTVDPLPIGDLPTRTAAYVKSALARVGITVTVRSQDLSAYLKRI
YTDRDFDFSINGMSNLFDPVAGVARLYTTSNFRRGVPFTNGSHYSNPEIDQLFTQVAEET
DETKRKQFFSQIQRILERDLPDINLVSPQYLTIYSRTVHNHTISPDGVSASFADVWLQR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcttcacgtcttcacgcgggcgatccgccgccatcacggcgagcgcctcgtccaccac
gtgctcggattcgcgctgacgctgctcattacgctggccacgccgcaagggcacgcacag
acgcgcggcggcacgctcaatttcgtcgtcacgccggagccgaccgcactcgtcgatctc
gccacgacggcaaccaacgtgctgaaggtcagtccgaaagttgtcgaaggattgctcgac
tacgacttccgcctgcaaccaaaaccctcgctcgccacctcatgggaggtcagcgacgac
agccgcaagttcatcttccatctgcggcacggcgtgaaatggcacgacggcaagcccttc
acgtccgccgacgtcgcgtattcgatccagacgctcaggcaggtacatccccgcgcgaag
accaccttcgcgaatgtcaccgatatcgccatgcccgatccctacaccgtcgtcatcaca
ctgtcgaaaccggcaccgtggctgctcaaggcgttctcttcgtcggaaacgccgatcgtg
ccgaagcacatctacgacaacaccgacgtactgggcaatcccgccgacaacgcacccatc
ggcactgggccgttccgcttcgtcaaatgggtgcgcggcagctacatcgaatacgagcgt
aacaacgactactgggataccggcaagccatacctcgatcgcattgtcgtcaaggtgatc
agcgatcctgccgcgcgtaccgtcgcgttcgaagatggctccgtggacctgagcggcgac
tcgcccgtaccgctgtccgatgtacagcgcctgaagggcgacccgaaactggcgcttgaa
acgcgcggctacgagtttcaggccggcgtcgcgcggatcgagttcaatctcgacaacccg
gcgctgaagaacctgaatgtgcgtcaggccatcgcgtccgcgctggaccgcgaggtgatc
cgcaaggtcatctactacggttacgcgacgccgcttgcgagtcccatcattccgtcgagc
ccctactacgacccgacgcctacgccttatccgttcaacgtcgagcgcgccaacgcattg
ctggacgaagccggttatccgcgcaaagccgacggcacgcgcttcgcgctcacggtggat
ccactgcccatcggcgatctgcccacgcgtacggcggcgtacgtgaagtcggcgttggcc
cgcgtcggcatcaccgttaccgtgcgcagccaggatctgtcggcctatctgaagcgcatc
tatacggaccgcgatttcgatttcagcatcaacgggatgagcaatctgttcgaccccgtc
gccggcgtggcgcggctctatacgaccagcaatttccggcgcggcgtgccgttcaccaac
ggctcgcactacagcaatccggagatagaccagctgtttacacaggttgccgaagaaacc
gacgagacgaaacgcaagcagttcttctcgcagatccagcgcattctcgaacgcgatctg
cccgacatcaacctggtgtcgccgcaatacctgaccatctattcacgcacggtgcacaac
cacacgatctcgccggacggcgtgtcggcgagcttcgccgacgtgtggctgcaacgttga
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