Paraburkholderia caribensis: K788_0001573
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Entry
K788_0001573 CDS
T04141
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bcai
Paraburkholderia caribensis
Pathway
bcai00260
Glycine, serine and threonine metabolism
bcai00460
Cyanoamino acid metabolism
bcai00630
Glyoxylate and dicarboxylate metabolism
bcai00670
One carbon pool by folate
bcai00680
Methane metabolism
bcai01100
Metabolic pathways
bcai01110
Biosynthesis of secondary metabolites
bcai01120
Microbial metabolism in diverse environments
bcai01200
Carbon metabolism
bcai01230
Biosynthesis of amino acids
bcai01240
Biosynthesis of cofactors
bcai04981
Folate transport and metabolism
Module
bcai_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K788_0001573
09102 Energy metabolism
00680 Methane metabolism
K788_0001573
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
K788_0001573
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
K788_0001573
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
K788_0001573
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
K788_0001573
Enzymes [BR:
bcai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
K788_0001573
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ALL70071
UniProt:
A0A0P0RMG5
LinkDB
All DBs
Position
unnamed:complement(724456..725778)
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AA seq
440 aa
AA seq
DB search
MFSYKNTIAVTDPELQQAISAETQRQQDHIELIASENYASPAVLEAQGSQLTNKYAEGYP
GRRYYGGCEHVDVVEQLAIDRAKQLFHAEYANVQPHSGSQANQAVYLSVLKPGDTILGMS
LAHGGHLTHGASVNVSGKLFNAVSYGLDPDTEEIDYQQVEQLAQTHKPRMIVAGASAYSL
VIDWQRFRAIADSVGASLLVDMAHYAGLVAAGLYPSPVGIADYVTTTTHKTLRGPRGGMI
LAGAQAAKAIDSTIFPGIQGGPLMHVIAGKAAALREAMTEAFRQYQQQVLINARTMAQTL
QQRGLRIVSGRTDSHVFLVDLRAKNITGKEAEAALGRAFITVNKNAIPNDPQKPFVTSGV
RIGSPAITTRGLREAEAQQLAHLMADVLDAPANDLVIRRTADAVLALTAKFPVYRDAPDA
QRHNAPAARDDSTAIGHAAH
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctacaaaaacacgattgccgtcaccgacccggaattgcaacaggcgatctcg
gcggaaacgcagcgtcaacaggatcacatcgaactgatcgcatcggaaaactatgcgtcg
cccgcggtgctggaagcgcaaggatcgcagctgaccaacaagtacgcggagggttatccg
ggccgccgctactacggcggctgcgaacatgtcgacgtggtcgagcagctcgccatcgat
cgggcgaagcagctgttccatgccgagtatgcgaacgtgcagccgcattcgggatcgcag
gccaatcaggccgtgtatctgtccgtgctgaagccgggcgacacgattctcggcatgtcg
ctcgcgcacggcggacacctcacgcatggcgcgtccgtgaacgtgagcggcaagctgttc
aatgccgtgtcgtacggtctcgatcccgatacggaagaaatcgactatcagcaggtcgag
caactcgcgcagactcacaagccgcgcatgatcgtcgcgggtgcctccgcgtactcgctc
gtgatcgactggcagcggtttcgtgcgatcgccgatagcgtgggtgcgtcgttgctcgtc
gacatggcgcactatgcgggcctcgtggcagcggggctttacccgagccccgtgggcatc
gccgattacgtcacgacgaccacccacaagacgctgcgcggtccgcgcggcggcatgatt
ctcgcgggcgcgcaagccgcgaaggcgatcgactcgacgatcttccccggcatccagggc
ggcccgctgatgcatgtgatcgcaggcaaggcggcggcgctgcgcgaagcgatgaccgag
gcgttccgccagtaccagcaacaggtgctgatcaacgcacggacgatggcgcagacgctc
cagcaacgcggcttgcggatcgtgtcgggccgcacggattcacacgtgttcctcgtcgat
ctgcgcgcgaaaaacatcacgggcaaagaggcggaagccgcgcttggccgcgctttcatc
acggtcaacaagaacgcgattccgaacgatccgcaaaagccctttgtgacgagcggcgtg
cggatcggttcgcccgccatcacgacgcgcggcctgcgcgaagcggaagcgcaacagctt
gcgcacctgatggccgatgtgctcgacgcaccggccaacgatctcgtgatccgccgcaca
gcggacgccgtgctcgcgctgaccgcgaagtttcctgtgtatcgcgacgcacccgacgcg
cagcgacacaacgcacccgcggcacgggacgacagcacggccatcggtcacgcggcgcac
tga
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