Paraburkholderia caribensis: K788_0001885
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Entry
K788_0001885 CDS
T04141
Name
(GenBank) RecD-like DNA helicase YrrC
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bcai
Paraburkholderia caribensis
Pathway
bcai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K788_0001885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcai03400
]
K788_0001885
Enzymes [BR:
bcai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K788_0001885
DNA repair and recombination proteins [BR:
bcai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K788_0001885
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
UvrD_C_2
Viral_helicase1
AAA_11
Herpes_Helicase
PIF1
nSTAND3
AAA_22
UvrD-helicase
ATPase_2
T2SSE
AAA_16
PhoH
NTPase_1
AAA_28
ABC_tran
SMC_N
NPHP3_N
SH3_13
nSTAND_NTPase5
AAA
NACHT
AAA_23
AAA_29
AAA_17
SLFN-g3_helicase
AAA_14
MobB
Rad17
AAA_7
ATP_bind_1
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
ALL71301
UniProt:
A0A0N7JW84
LinkDB
All DBs
Position
unnamed:2008155..2010428
Genome browser
AA seq
757 aa
AA seq
DB search
MVKPDPQGLLLRVLSVRVQNRDGVIFRGQVISEAGEIVDTHLEVVARLQSKGVGVKVQPG
QWWQVTGVASRKRYVNATGFEVTEDHIEVKPGEALMMMPSGLHIVDYLVRNPRFEGVGQV
TAQRLWETFESELFSVLDEGDYQALADVVTPQKARVLIEGWRAEGLGKTLQWLQTHDVGL
VIGRRVVGYFGAQAIEKIIENPYRLLSFAAGWSEVDSLARNRLGIQPDDSRRLAAAVEEV
VYRRFSLGDTFVPLNDLIAGIKQLLRDDSHAMDLFDTIDAAITYCEKAGRLLFDSQGNAY
SLGASILENTVVDCIVARTGLVSPLCRIDAVIERYEAREGGGFRLNDEQRAAVHLVADHH
FSVITGGAGCGKTTVLKAVCEVLDEQGYDIVQSALAGKAVKRMQESTGRPALTLASLIKK
LNEEGAAMAGKAQPMAVLIDEASMVDLISFSALARKLDDNVKIVLIGDPHQLPPVGPGLI
LHCLTTGLVPHVELKVPKRFGSEIAQVANMIRDGALPNLDAQGRVRLLDVADTAMAATAA
ELYLQHPNDTVVLSTTRQVALLVNQIIQGVLSAGRTEVQTWNDEFACFEVAGLKEGDLVI
CTKNHWDFGIQNGSMGRLLIVQTGSDSLGTIEWDDGNVRKFDARFLESIELGYALTVHKS
QGSQWKRVVVCLPSSSRMIDRSLVYTAVTRAQQEVILLGQKPKLKALIGRPKTADQRLVG
LPRRLTAARNATTAALPSDVRLPLGHATHCDRRGSVF
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaagcctgatccgcagggattgctgcttcgcgtgctgtccgtgcgggtgcagaac
cgcgacggtgtgatcttccgcggacaagtcatcagcgaagctggggagattgtcgacacg
catctcgaagtggtggctcgtttgcagtcaaagggcgtcggcgtcaaagttcagccgggc
cagtggtggcaggtcacaggggtcgccagcagaaagcgttacgtcaacgcaaccggattt
gaagtgacggaggaccacatcgaggtcaagcccggcgaggcgctcatgatgatgccctcg
gggctgcacatcgtcgattacctggtgcgcaacccgcgcttcgaaggcgtgggccaggta
actgcccagcgcctctgggaaacgttcgagtccgaactgtttagcgtgctcgacgagggt
gactatcaggcacttgctgatgtggtgacacctcaaaaggcgcgcgtgctgattgaaggg
tggcgcgcagagggcctaggaaaaacgctgcaatggctccaaacacacgatgtcgggctt
gtcatcggtcggcgcgtcgtggggtacttcggcgcccaagcgattgaaaagattatcgag
aacccgtaccggctgttgagcttcgctgcggggtggagcgaggttgactcacttgcgaga
aaccgcttgggaattcaacctgatgattcacgtcgactcgccgcggcagtcgaagaggtt
gtctatcgaagattcagcctgggtgacaccttcgttccgctcaatgacctcattgccggg
atcaagcaactcttgcgagatgattctcacgcgatggatctcttcgatacgattgatgcg
gccatcacgtattgtgaaaaggcgggccgactcctcttcgactcacagggcaatgcatac
agcctcggcgcgtcgatcttggagaacaccgtcgtcgactgcatcgtcgcgcgcaccggt
ctggtcagtccactttgccggatcgacgcggttattgagcggtacgaggccagggagggt
ggcgggttccggctcaatgacgagcaacgcgcagccgtgcatcttgtggccgaccaccac
ttcagcgtgattaccgggggggcgggatgcgggaagactacagtcttaaaagccgtgtgt
gaggtgcttgacgagcaaggatacgacattgtgcagtcagccctggctggcaaggctgtc
aaacgcatgcaggagagcacgggccggcctgcgctgaccttggcttcgctcatcaagaaa
cttaacgaggaaggcgccgccatggccggcaaggcgcagccgatggctgttctcatcgat
gaggccagcatggtggacctgatctccttctctgcgttggcgcgcaagctcgatgacaac
gtgaaaatcgtgctcattggagatccgcaccaattgcccccggttgggcctggcttgatt
cttcattgcttgaccacagggctggtgccgcacgttgaattgaaggtgcccaagcgattc
ggaagcgaaatcgcacaagttgcgaacatgatccgcgacggggcactgccgaatcttgat
gcgcaaggccgcgtacgcttgcttgacgtcgcagacactgccatggcggctactgccgca
gagttgtacttgcagcatccaaacgacactgttgttttgagtaccacccgacaggtcgcc
ctgttggtcaatcagatcatccaaggggttctttcggctggacggaccgaggttcaaacc
tggaatgacgaattcgcctgttttgaagtcgcgggactcaaagaaggtgacctggtgatc
tgcaccaagaaccactgggactttggaatccaaaacggttcgatgggccggctactgatc
gtccagactgggtcagactcactcgggacgattgagtgggacgacgggaatgtgcgtaag
ttcgatgcccgcttcctcgagagcatcgagcttggctacgcgttaaccgttcataagagc
caagggtctcaatggaaacgcgtagtcgtctgtctaccgtcgagcagccggatgatcgat
aggagccttgtctacaccgcggtcacgcgcgcacagcaggaagtcatactgttaggacaa
aagccaaaattgaaggctcttattggccggccaaagactgcggatcagcgccttgtcggt
cttccacggcgattgaccgccgcgagaaacgcgaccacggcggcactaccctctgatgtg
cgcctacctttggggcatgctacacactgcgatcgtcgaggctcagtattttga
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