Paraburkholderia caribensis: K788_0002402
Help
Entry
K788_0002402 CDS
T04141
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bcai
Paraburkholderia caribensis
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcai03009
]
K788_0002402
Enzymes [BR:
bcai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
K788_0002402
Ribosome biogenesis [BR:
bcai03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K788_0002402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ALL64898
UniProt:
A0A0P0R9H3
LinkDB
All DBs
Position
1:2229600..2231420
Genome browser
AA seq
606 aa
AA seq
DB search
MTDIHDTDSSESERAVAAARPDETRTAQTSAGDSERNAPDAEGDERPRRGLRRGPRSLIA
RRRAGTKAKAADAAAQPAPVVTEAPPDGEVVAQVRMPRKDAAAKGQGQGGRRAGGKQGGG
QQGPRQGNQGNQRKSRGGDAGDVAPAVAAEGDKQDDLFSWVTSPAFDADNSATGGVRAPM
LRRGRPAAPKRVLSPDDDAPKLHKVLAEAGMGSRREMEELIVAGRVSVNGEPAHIGQRIM
PTDLVRINGKPVKRKLQNKPPRVLLYHKPTGEIVSHADPEGRPSVFDKLPPMKTAKWLAV
GRLDFNTEGLLMLTTSGDLANRFMHPRYSVEREYAVRVVGELAEGNRQKLLHGVELEDGP
ANFLRIRDGGGEGTNHWYHVALAEGRNREVRRMFEAVGLMVSRLIRTRHGPITLPRGLKR
GRWEELEDNQVRSLLASVGLKAPTEEKGGRRGEPERRQPDPMQTSMGFINREPVLMSHGR
FDQQQPRGGGQNRRGGKGASAFGALNSGAGGGFGNGHPNRGEGRGRPGRGDVDGNRAPSG
NRTGAGANAKRGGSGGSRTPNGAPGGNRSNNGGNRTGGNPGAGGGNPGAGGGNRSGGAPR
NRSRGR
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
ttgacagacatccacgacaccgattcgtccgaatccgagcgcgccgtcgctgccgcgcgc
cccgacgaaacgcgcacggcgcaaacgtcggcgggcgacagcgagcggaacgcgccggac
gccgaaggcgacgagcgcccgcgccgcggcctgcgacgcggcccgcgcagcctgatcgcg
cgtcgccgcgcggggacgaaggcgaaggcggccgacgctgccgcgcagccggcacccgtc
gtgacggaagcgccgcccgacggcgaagtcgtcgcgcaagtgcggatgccgcgtaaggac
gcggccgcaaaaggacaaggccagggcggccgccgcgcgggcggcaagcagggcggcggc
cagcaaggtccgcggcaaggtaatcaaggcaatcagcgcaagagccgtggcggcgatgcg
ggtgacgtggcccccgcagtcgctgccgaaggcgacaagcaggatgatctgttttcctgg
gtgacgtcgcccgccttcgatgccgacaactccgcaacgggcggcgtgcgtgcgccgatg
ttgcgccgtggccggcctgccgcacccaagcgcgtgctgtcgccggacgacgacgcgccc
aagttgcacaaggtgctcgccgaggcgggcatgggctcgcgccgcgagatggaagagctg
atcgtcgcgggccgcgtgtcggtcaacggcgagccggcgcacatcggccagcgcatcatg
ccgaccgatctggttcgcatcaacggcaagcccgtcaagcgcaagctgcagaacaagccg
ccgcgcgtgctgctgtatcacaagccgacgggcgaaatcgtcagccacgctgacccggaa
ggccgtccgtcggtattcgacaagctgccgccaatgaagaccgcgaagtggctcgctgtc
ggccgcctcgacttcaatacggaaggcctgttgatgctgaccacctcgggcgatctggcg
aaccgcttcatgcatccgcgctacagcgtcgagcgtgaatacgcggtgcgtgtggtcggc
gaactggcggaaggcaaccggcaaaagctgttgcacggcgtcgagctggaagacggcccg
gcgaacttcctgcgcattcgcgacggcggcggcgagggtacgaatcactggtatcacgtc
gcgctggctgaagggcgcaaccgcgaagtgcgccggatgttcgaggcggtcggcctgatg
gtcagccggctgatccgcacgcgtcacggtccgatcacgctgccgcgcggcctgaagcgc
ggccgttgggaagagctcgaggacaatcaggtgcgcagcctgctggcatcggtgggcctg
aaggcaccgaccgaggagaagggcggacgccggggcgagccggagcgtcgtcagcctgat
ccgatgcagacgtcgatgggcttcatcaaccgcgagccggtgctgatgtcgcatggacgt
ttcgatcagcagcaaccgcgcggcggcggccagaaccggcgcggcggtaagggcgccagt
gcattcggcgcgttgaattccggcgcgggcggcggcttcggcaacgggcaccccaatcgc
ggcgaagggcgtggccgtccgggtcgcggcgacgtcgacggcaatcgcgcgccttcgggc
aaccgcacgggcgcgggcgccaacgcgaagcgcggcggcagcggcggtagccgcacgccg
aacggtgcgcccggtggcaaccgttcgaacaatggcggcaatcgcacgggcggcaatcct
ggcgccggcggcggcaatcctggcgccggcggcggcaatcgcagcggcggcgcgccgcgc
aaccgttcgcgcggacgctga
DBGET
integrated database retrieval system
