KEGG   Paraburkholderia caribensis: K788_0002404
Entry
K788_0002404      CDS       T04141                                 
Name
(GenBank) NusA antitermination factor
  KO
K02600  transcription termination/antitermination protein NusA
Organism
bcai  Paraburkholderia caribensis
Brite
KEGG Orthology (KO) [BR:bcai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bcai03021]
    K788_0002404
   03009 Ribosome biogenesis [BR:bcai03009]
    K788_0002404
Transcription machinery [BR:bcai03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     K788_0002404
Ribosome biogenesis [BR:bcai03009]
 Prokaryotic type
  rRNA transcription factors
   K788_0002404
SSDB
Motif
Pfam: NusA_N KH_5 HHH_5 S1 KH_NusA_C Prot_ATP_ID_OB_C KH_2 KH_1
Other DBs
NCBI-ProteinID: ALL64900
UniProt: A0A0P0RA65
LinkDB
Position
1:2232325..2233800
AA seq 491 aa
MSREVLMLVDALAREKNVDKDVVFAALEAALASASKKLFDEDADIRVHIDRESGEHETFR
RWKVVPDEAGLQEPDQEILLFEAREQKADAQIDDFLEEPVPSIEFGRIGAQAAKQVILQK
VRDAEREQILNDFLERGESIMTGTVKRLDKGNFIVESGRVEALLRRDQLIPKENLRVGDR
VRAYIGKVDRTARGPQIELSRTAPEFLMKLFEMEVPEIEQGLLEIKAAARDPGVRAKIGV
VAYDKRIDPIGTCVGIRGSRVQAVRNELGGENVDIVLWSEDPAQFVIGALAPAAVQSIVV
DEEKHSMDVVVDENELAVAIGRSGQNVRLASELTGWQINIMTPDESAQKQNQERSVLRDL
FMARLDVDEEVADILIDEGFTSLEEIAYVPLNEMLEIEAFDEDTVHELRNRARDALLTMA
IANEEKVEGVALDLKSLDGMDDELFAKLAEHQIHTRDELAELAVDELVEMTGMNEDAAKA
LIMKAREHWFQ
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgagtcgcgaagtgttgatgctggtggatgcgctggcacgcgaaaaaaatgtcgacaag
gacgtggtgtttgccgcgctcgaggcagcgctcgcgtctgcatccaagaaactcttcgac
gaagacgcggacatccgcgttcatatcgaccgtgaaagcggcgagcacgagacgttccgt
cgctggaaagtcgtgcccgacgaagccgggctgcaggagccggatcaggaaatcctgctg
ttcgaagcgcgcgagcagaaggccgacgcgcagatcgacgacttcctggaagaacccgtt
ccgtccatcgaattcggccgtatcggcgcgcaggctgccaagcaggtgattctgcagaag
gtgcgcgacgcggaacgcgagcagatcctgaacgacttcctcgagcgcggcgaaagcatc
atgacgggtaccgtcaagcgtctcgacaagggcaacttcatcgtcgaatcgggtcgtgtc
gaagcgctgctgcgccgcgaccagctgattccgaaggaaaacctgcgcgtcggcgaccgt
gtgcgcgcgtacatcggcaaggtcgatcgcaccgcgcgcggtccgcagatcgaattgtcg
cgcacggcgcccgagttcctgatgaagctgttcgaaatggaagtgccggaaatcgagcag
ggcctgctggagatcaaggcggcggcgcgcgatcccggcgtgcgtgcgaagatcggcgtg
gtcgcttacgacaagcgcatcgatcccatcggcacctgcgtcggcattcgcggctcgcgc
gtgcaggccgtgcgtaacgagctcggtggcgaaaacgtcgacatcgtgctatggtcggaa
gatcccgcccagtttgtgatcggcgcgctcgcgccggcagccgtccagtcgatcgtcgtc
gatgaagaaaagcattcgatggacgtcgtcgtcgacgaaaacgaactggctgtcgctatc
ggccgcagcggccagaacgtgcgtcttgccagcgaactgaccggctggcagatcaacatc
atgacgccggacgagtctgcgcaaaagcagaaccaggaacgcagcgtactgcgcgacctg
ttcatggcgcgtctcgatgtcgacgaagaagtcgccgacatcctgatcgacgaaggtttc
acgagtctcgaagagattgcctacgtgccgctcaacgagatgctcgaaatcgaagcattc
gacgaagacacggttcacgaactgcgtaaccgcgctcgtgacgctctgctgacgatggcg
attgcgaacgaggagaaggtcgaaggcgttgcgctcgacctgaagagtctcgacggtatg
gacgacgagctgttcgcgaagctggctgaacatcagatccatacacgcgacgagctggca
gaactggccgtcgacgagctggtcgagatgaccggcatgaatgaagacgccgccaaggcg
ttgattatgaaggcccgtgaacactggtttcaatga

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