Paraburkholderia caribensis: K788_0002691
Help
Entry
K788_0002691 CDS
T04141
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bcai
Paraburkholderia caribensis
Pathway
bcai00260
Glycine, serine and threonine metabolism
bcai00460
Cyanoamino acid metabolism
bcai00630
Glyoxylate and dicarboxylate metabolism
bcai00670
One carbon pool by folate
bcai00680
Methane metabolism
bcai01100
Metabolic pathways
bcai01110
Biosynthesis of secondary metabolites
bcai01120
Microbial metabolism in diverse environments
bcai01200
Carbon metabolism
bcai01230
Biosynthesis of amino acids
bcai01240
Biosynthesis of cofactors
bcai04981
Folate transport and metabolism
Module
bcai_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K788_0002691
09102 Energy metabolism
00680 Methane metabolism
K788_0002691
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
K788_0002691
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
K788_0002691
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
K788_0002691
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
K788_0002691
Enzymes [BR:
bcai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
K788_0002691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ALL66170
UniProt:
A0A0P0RCJ2
LinkDB
All DBs
Position
2:4703..5959
Genome browser
AA seq
418 aa
AA seq
DB search
MFSKEQTIAGFDPELSNAMLLERQRQEDHIELIASENYTSPRVLEAQGSVLTNKYAEGYP
GKRYYGGCEHVDVVESLAIERARQLFGAAYANVQPHSGSQANAAVYLALLAPGDTILGMS
LAHGGHLTHGAKVSFSGKVFNAVQYGVDASTGLIDYDEVERLALQHRPKMIVAGFSAYSR
VLDFARFREMADRIGAYLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLI
LARANEAIEKKLNSMVFPGTQGGPLMHVIAAKAVAFREALGAEFVAYQKQTLANARAMVA
VFIERGYKIVSGGTDDHLFLVDLIDKGITGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GIRIGTPALTTRGFDENDAKLTASLVCDVLDHLGDAQTEARVREQVAQLCARLPVYDR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaaagaacagacgatcgcaggcttcgatcccgaactgtcgaacgcaatgctg
ctcgagcggcaacggcaggaagatcatatcgagctgatcgcatcggaaaactacacgagc
ccgcgcgtgctcgaagcacagggttcggtgctgaccaacaagtacgcggaaggctatccc
ggcaagcgttattacggcggatgcgaacacgtggacgtggtcgagtcgctcgcgatcgag
cgggcccggcagctgttcggtgcagcgtatgcgaacgttcagccgcacagcggttcgcag
gccaacgccgccgtgtatctcgcgttgctcgcacccggggacaccattctcggcatgagc
ctcgcgcacggcggtcacctgacgcacggtgcgaaagtgtcgttttcaggcaaggtgttc
aatgccgtgcaatacggcgtcgatgcgtcgaccggcttgatcgattacgacgaagtcgag
cggcttgcactccaacatcgtccaaagatgatcgttgcgggcttttctgcttactcgcgc
gtgctcgactttgcgcgctttcgtgagatggccgatcgtatcggtgcgtatcttttcgtc
gatatggcgcatgtagcgggtctcgttgccgctggcctatatccgaatcccatcccgttc
gcggatgtcgtgacgaccactacgcacaagaccttgcgcggtccgcgaggcggcctgatt
ctcgcgcgcgcaaacgaagcgatcgaaaagaagctcaactccatggtctttccgggcacg
caaggcggcccgctgatgcacgtgatcgcggcgaaagcggtcgccttccgcgaagcgctc
ggcgcggagttcgttgcctatcagaagcagacattggccaatgcgcgcgcgatggtggcc
gttttcatcgaacgtggctataagatcgtatcgggcggcaccgacgatcatctgttcctg
gtggacctgatcgacaaaggcatcacgggaaaggacgctgacgccgcgctcggccgcgcg
catatcacggtgaacaagaacgcggtgccgaacgatccgcaatcgccattcgtgacgagc
ggcatccgcatcggcacgcccgcgctcaccacgcgcggcttcgatgagaacgatgcgaag
ctcacggcgtcgctcgtatgcgatgtgctcgatcatctgggcgacgcgcagacggaggcc
cgcgtacgcgagcaggttgcgcagctttgcgcgcgattgcccgtgtatgaccgttga
DBGET
integrated database retrieval system