Paraburkholderia caribensis: K788_00029275
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Entry
K788_00029275 CDS
T04141
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bcai
Paraburkholderia caribensis
Pathway
bcai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K788_00029275
09124 Replication and repair
03420 Nucleotide excision repair
K788_00029275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcai03021
]
K788_00029275
03036 Chromosome and associated proteins [BR:
bcai03036
]
K788_00029275
03400 DNA repair and recombination proteins [BR:
bcai03400
]
K788_00029275
Enzymes [BR:
bcai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
K788_00029275
Transcription machinery [BR:
bcai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
K788_00029275
Chromosome and associated proteins [BR:
bcai03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
K788_00029275
DNA repair and recombination proteins [BR:
bcai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
K788_00029275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
DUF7711
GlgS
Motif
Other DBs
NCBI-ProteinID:
ALL66649
UniProt:
A0A0P0RDL4
LinkDB
All DBs
Position
2:complement(501715..503982)
Genome browser
AA seq
755 aa
AA seq
DB search
MTYVVAVRTLCEFTARRGDLDLRFTPAPSALEGIAGHQAVTARRASGYEAEITLTGTHGG
LTVRGRADGYDRALNRLEEIKTHRGDLERMPANHRALHWAQALVYGHLLCEARALEALTV
ALVYFDIASQKETVLTEQHTAASLRAFFEDQCERFVAWAAREAAHREARNAALNVLRFPY
GEFRSGQRELSVAVFRAARDGHCLMAQAPTGIGKTLGTIFPLLKACGADHLDRVFFLTAK
TPGRALALEAIESLHRGEAALPLRTLELVARDKACEHPDKSCDGDSCPLARGFYDRLPAA
RDTALQARTLDRAAVREAALAHGICPYYLAQEMARWCDVVIGDYNYYFDSSAMLYALTQL
NGWRVAVLADEAHNLPDRARRMYSATLDQHAFRGARHAAPAALKKPFDRLNREWNALNRE
RHAAYEVLPGVPPKLQSALQNLIASIGDQLAETPQSVDENALRFYFDALHFMSLVEQFGD
HSIVDVTLETPHGAARAKPATQICVRNVIPAPFLKPRYAAARATIVFSGTLSPQHFYRDM
LGLPGDTGWLDVEGPFRAEQLNVHVAHHVSTRWRDRERSLEPIVDLIAQQYAARPGNYLG
FLSSFDYLQRVAGSMRERHPQVPIWTQEPRMDESARDAFLARFATGGAGVGFAVLGGAFS
EGIDLVGERLIGAFIATLGLPQMNDVNEQMRRTFDAQFGNGYDYAYLYPGMQKVVQAAGR
VIRTEHDAGVVHLIDDRYRRADVKRLLPRWWKIAT
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgacctacgtcgtcgccgtgcgcacgctctgcgaattcaccgcgcggcgcggcgatctc
gatctgcgcttcacgcccgcgccgtcggcgctcgaaggcatcgccggacatcaggccgtg
acggcgcgccgcgcatccggctacgaagcggagatcacgctgacgggtacgcatggcggt
ctcacggtgcgcggccgcgccgacggctacgaccgggcgttgaaccggctcgaggagatc
aagacgcatcgcggcgatctcgaacggatgcccgcgaatcatcgcgcgctgcattgggcg
caggcgctggtgtatgggcatctgctgtgcgaggcgcgcgcgctcgaagcactgacggtc
gcgctcgtgtatttcgatatcgccagccagaaggaaaccgtgctgacggaacagcacacg
gccgcgtcgctgcgcgcattcttcgaggatcagtgcgagcgcttcgttgcgtgggccgcg
cgggaagcagcgcatcgcgaggcgcgcaacgcggcgttgaacgtgctgcgctttccctac
ggcgagtttcgcagcggtcagcgcgaactgtccgtggccgtgtttcgcgcggcgcgcgac
gggcactgtctgatggcgcaggcgccgacgggcatcggcaagacgctcggcacgatcttt
ccgctgctcaaggcgtgcggagcggatcatctcgaccgtgtgttctttctcacggcaaag
acgccgggccgcgcgctcgcgctcgaagccatcgagtccctgcatcgcggcgaagccgcg
ctgccgttgcgcacgctcgagctcgtcgcgcgcgacaaggcctgcgagcatcccgacaaa
tcctgcgacggcgattcctgtccgctcgcacgcggcttctacgatcgtctgcccgcggcg
cgcgacacggcgttgcaggcgcgcacgctcgaccgcgcagccgtgcgcgaagcggcgctc
gcgcatggcatctgtccgtactatctcgcgcaggaaatggcgcgctggtgcgacgtcgtg
atcggcgactacaactactacttcgacagcagtgcgatgctgtacgcgctcacgcagctg
aacggctggcgcgtcgccgtgctcgccgacgaagcgcacaatctgcccgaccgcgcgcgc
cgcatgtacagcgcgacgctcgatcagcacgcgtttcgcggcgcccgccatgccgcgccc
gcagcgctcaaaaaaccgttcgatcggctgaatcgggagtggaatgcgttgaaccgcgag
cgccatgccgcgtacgaggtgctgcccggcgtgccgcccaaactgcagtcggcgctgcaa
aacctgatcgcatcgattggcgatcagcttgcggaaaccccgcaatccgtcgatgaaaac
gcgctgcgtttctatttcgacgcgctgcatttcatgtcgctcgtcgagcagttcggcgat
cattcgatcgtcgacgtgacgctcgaaacaccgcacggcgcagcccgcgcgaagcccgcc
acgcagatttgcgtgcgcaacgtgattcccgcgccgttcctcaagccgcgctacgccgcc
gcgcgcgcgacgatcgtgttctccggcacgctcagcccgcagcatttctatcgcgacatg
ctcggtctgcccggcgacacgggctggctcgacgtcgaagggccgttcagggcggagcag
ctgaatgtgcatgtcgcgcatcacgtgtcgacgcgctggcgcgaccgcgagcgctcgctc
gaaccgatcgtcgatctgatcgcgcagcagtacgccgcgcgtccgggcaactacctcggc
tttctgagcagcttcgattacttgcagcgcgtcgcgggatcgatgcgcgaacggcatccg
caggtgcccatctggacgcaggagccgcgcatggacgagagcgcgcgtgacgcgttcctc
gcgcgcttcgcgacgggcggcgcgggcgtgggcttcgcggtgctgggcggggcgttttcg
gagggcatcgatctggtcggcgaacggctcatcggcgcgttcatcgcgacgctcggcttg
ccgcagatgaacgacgtcaacgaacagatgcggcgcaccttcgatgcgcagttcggcaac
ggctacgactatgcgtatctgtatccgggcatgcagaaggtcgtgcaggcggcggggcgc
gtgattcgcaccgagcacgatgcgggcgtcgtgcatctgatcgacgaccggtatcggcgc
gcggatgtgaagcgcctgttgccgcgctggtggaagatagcgacatag
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integrated database retrieval system
