Paraburkholderia caribensis: K788_0002983
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Entry
K788_0002983 CDS
T04141
Name
(GenBank) WD40 repeat protein
Organism
bcai
Paraburkholderia caribensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EML_2
nSTAND1
WD40_WDHD1_1st
WDR55
WD40
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
EIF3I
Tricorn_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_EML
WDR90_beta-prop_4th
RMC1_N
Tricorn_N
Beta-prop_WDR41
Beta-prop_RIG_2nd
Nbas_N
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
DUF7165
RsgA_GTPase
AAA_22
ATPase_2
Beta-prop_RIG_1st
NOL11_N
MMR1
SieB
Borrelia_P83
Motif
Other DBs
NCBI-ProteinID:
ALL66736
UniProt:
A0A0P0RDV7
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All DBs
Position
2:complement(599919..603788)
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AA seq
1289 aa
AA seq
DB search
MADEAVDSGHEELSADALTPSRPWPGLASFTEADQYFFRGRESEAEELARLVRREVLTVL
FGRSGLGKTSLLNAGLFPRLRENLHLPVMIRLAHGAALPLRDQVWQALAAACSAAGVDAT
APLPEASLWEHFHRAGAGFWNTRNRAVIPVLVFDQFEELFTLGQVDEETRRRAAAFVNEL
SDLIENRPPEALRQALDAGAVPAQSIDFSRRDCKVVLSFREDFLADVEGLRANIPSLMRN
RYRLLPMDGYQARAVVDSGSALVVPAVAERIIGLAWRNRAEAPSADDYGRMEVDPALLSV
ICSELNLRRIAQGSDHIGAELVASAEREILVDFYERSLRDVDPRVRVFIEDELITDAGHR
DSYALEDALVLPGISRADIERLVAGRLLRVDERFGVRRLELTHDVLTRVVKDSRDARQAR
DAAAAAAARVREALEIQRRNRRNAMWVGVALVFAMALLASAGFAAYEATVQRNRARMAQN
DAVAAKQQLVKETEKSIQAKLAIEEAQQQMQRAAVELQKMGDAAAEADRRAKAAQASAEK
DTELAAIQQKRADEATAHAGQLTREAIISGVIANASAEDAEHPDRALLLGAEASRAAPVR
LDAQLTQLARLIADDGVHKMLPIGEKVTASATSPDGKRMAMGTDGGDVIDLDLASWTVLR
RWRGHEAAVQALAYDQDASRLVSADAKRTVIAWQARDGKELGRVSVGDAPDISRIAVSHH
GQFVAVAGHSSVHVLTMPGQPGVPVLKRVGTGDGQCLGFGREDATLLYGSGDSIVVAPLP
GVAATGPGTGAEPSLRATRPLLTRTPDCRFDALLHSNPDGKRVIELRDESTDTVIGTVDA
AEGELQAVFESGGGFFALRSAQTTSVWKLQPLQKIGAVAGEDGRAVRMSLSPDGRWLATA
LASGQEMVQPVDGGRARVKTRQGQRMAAFQFSPNGSTVAYQIDQQETLYTIWSLAPGSVL
RSGKGLYHAEEVEFNRSGKVLATVPAGTDIADFWNPDDVTQLRSEPGMRRAEFSPDGSLL
AIQRANGTVDVVDMTGRVLRQLQKRADADVERFAISWDNRRLAITLSDGSIHVYEIDTGR
DTVLSGKRGSEVVAFGPDGRVLAVGGDDGVVRLYRFGSRTAMTELADPHKDRVRQLVFSP
DGKRLASGGDDEMAILHDVESGQTVARFGPHDGPVDRLVFVGNGEALVSGEAKGERQVWD
LRKGSQLARLRAAGGTVSSVDISPGGRRVAVLHEDRTVSLRNWDSESMLTDACAIANRNL
DCAEWRQFMSGMPYRKTCAALPAPKMVCR
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgaagctgtggactccgggcacgaagaactgtcggcagacgcgctgacgccg
tcgcgcccctggccaggcctcgcgtcgttcacggaggcggaccagtactttttccgcggc
cgcgagagcgaggcggaggaactcgcgcggctggtgcgccgtgaagtgctgaccgttctg
ttcggacgctcggggctgggcaagacctcgttgctcaatgcgggactctttccgcgtttg
cgcgagaatctgcatctgcccgtgatgatacgtctcgcgcacggcgccgccttgccgctg
cgcgaccaggtctggcaggcgctcgccgccgcttgcagcgccgctggtgtcgacgcaacc
gcgccgctgccggaggcgtcattgtgggaacactttcatcgcgccggcgccgggttctgg
aacacgcgcaaccgggctgtgatacccgtgctggttttcgaccagttcgaagagctgttc
acgctcggccaggtcgacgaggagacgcgccgtcgtgcggcggcgttcgtcaacgagctg
tcggacctgatcgagaaccgcccgcccgaagcattgcgccaggcgctcgatgccggcgcg
gtacccgcgcagagcatcgatttcagccgccgggactgcaaggtcgtgctgagctttcgc
gaagacttcctcgcggacgtcgaaggcttgcgcgcgaacattccgtcgctgatgcgtaac
cgctaccggctgttgccgatggacggctaccaggcccgtgcggtggtcgacagcggcagc
gcgctcgtggtgccggcggtggccgaacgcatcatcggtctcgcgtggcgcaatcgcgca
gaagcgccttcggcagacgactatggccggatggaggtcgatcccgcacttcttagcgtg
atctgtagcgaactcaacttgcgccgtatcgcacagggtagcgatcacatcggtgcagaa
ctggtggcgagcgccgagcgcgagatactggtcgatttctatgagcgttcactgcgcgat
gtcgacccgcgcgtgcgcgtgttcatcgaggatgagctgatcacggacgccggccatcgg
gacagctatgcgctcgaagatgcgctcgtgctgcccggtatctcacgcgccgatatcgag
cggctggtggccgggcggctgctgcgcgtcgatgaacgcttcggcgtgcgccggctcgaa
cttacccatgacgtgctgacacgcgttgtcaaggacagtcgcgatgcgcggcaggcccgt
gacgcggcggcggccgccgccgcgcgcgtgcgtgaggcgttggagatacagcggcgtaac
cgtcgcaacgcgatgtgggttggtgtcgcgctcgtgtttgcaatggctttgctggccagt
gccggattcgccgcctatgaagcgacggtgcaacgaaaccgtgcccgcatggcgcagaat
gacgccgtggccgcgaagcagcagttggtcaaggagaccgagaaatcgatccaggcgaag
ctcgccatcgaggaagcccagcaacagatgcagcgggcggctgtggaactgcaaaagatg
ggcgacgccgcagccgaggccgatcgtcgtgcgaaagcggcacaggcgagcgcagagaag
gataccgagttggcagccatccagcaaaagcgggccgacgaagccaccgctcatgccggg
caactgactcgcgaagcgatcatctccggcgtgattgccaacgccagcgccgaggacgcg
gagcatcccgatcgcgcgctgctgctgggcgccgaagccagccgcgccgccccggtgcgg
ctggatgcgcagcttacgcaactggcgcggctgattgctgacgacggcgtgcacaaaatg
ctgccgatcggcgagaaggtgaccgcgtccgcaaccagccccgacggcaagcggatggcc
atgggcaccgacggcggcgacgtcatcgacctggatctggcgagctggaccgtgctgcgg
cgttggcgaggccacgaagctgccgtgcaggcgttggcgtacgatcaggacgcgtcacgc
ctggtatcggccgatgcgaagcgtaccgtcatcgcctggcaagcgcgagatgggaaggaa
ctcgggcgtgtctccgtcggcgatgcccccgacatcagcaggatagctgtcagtcaccac
ggtcagttcgtcgcggttgcagggcattcgtccgtccatgtgttgacgatgcccggccag
ccgggtgtccctgtgctgaagcgcgttggcaccggcgacggtcaatgccttgggttcggc
cgtgaggacgcgacgctgctctacggttccggcgacagcatcgtcgtcgcgccgctgcct
ggcgtcgccgccacgggtcctgggacgggcgccgaaccttcgctcagggccacacgccct
ttgctcacgcgcacgcccgactgccgcttcgatgcgctgctccatagcaaccccgatggc
aagcgcgtcatcgagcttcgcgatgaatcgacggatacggtcatcggaacagtggacgca
gccgaaggcgaactgcaggcagtgttcgagtcaggaggcggcttttttgcgcttcgaagc
gctcaaacgactagcgtgtggaagctgcaaccactgcaaaagatcggcgcggttgcaggt
gaagatggcagggccgttcgcatgtcattgagcccggacggccgctggctggccacggct
ctcgccagcggacaggagatggttcagcctgtcgacggcgggcgcgcgcgcgtcaagacc
cggcaaggacagcgcatggccgcctttcagttttcgccgaatgggagcaccgtcgcgtac
cagatcgatcaacaggagacgctgtacaccatatggtcgctcgcgccggggtcggtgttg
cggtccggcaaaggcctgtatcacgctgaggaagtggagttcaaccgcagcggcaaggtg
ctggcgacggttcccgcaggcaccgatatcgccgacttctggaatcctgatgatgtcacg
caattgcgcagcgagcccggcatgcgccgcgccgaattcagtcctgacggttcgcttctc
gctattcagcgggccaacggcactgtcgatgtagtggatatgacgggtcgcgtccttcgg
cagcttcagaaacgggcggatgccgacgtcgagcgctttgcgatcagttgggacaatcgg
cgcctggcgatcacgctgtcggacggctcgatccatgtgtacgagatcgacaccggacgc
gacaccgtgctgtcggggaagcgcgggtccgaagtcgtcgcgtttggccctgacggccgg
gtgctggcggtggggggcgacgatggcgtggtgcgcctgtaccgcttcgggtcgcgaacg
gccatgacagaactggctgatccgcacaaggatcgggtgcggcagctggtgttcagccct
gacggcaagcggctcgcatcggggggcgacgatgagatggcgattctgcacgacgtcgaa
agcggacaaaccgtggccagattcggccctcatgacggcccggttgaccggctggtattc
gttggcaacggcgaggcgctcgtcagcggtgaagcgaagggagaacgccaggtgtgggat
ctgcgcaaggggagccaactggcgcggctgcgtgctgcgggcggcactgtgtcgagcgtg
gacatcagtccaggcggacgtcgtgtggccgtgctgcatgaggatcggactgtgtcgttg
cgcaactgggacagcgagtcgatgctgacggatgcttgcgcgattgcaaatcgcaatctt
gactgtgcggagtggcggcagtttatgtcggggatgccttatcgcaagacgtgtgcggcg
ttgcctgcgccgaagatggtttgtcggtga
DBGET
integrated database retrieval system