Paraburkholderia caribensis: K788_0003066
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Entry
K788_0003066 CDS
T04141
Name
(GenBank) Diguanylate cyclase
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bcai
Paraburkholderia caribensis
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcai03000
]
K788_0003066
Transcription factors [BR:
bcai03000
]
Prokaryotic type
Helix-turn-helix
Other families
K788_0003066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
HTH_8
HTH_28
HTH_29
HTH_50
HTH_23
GAF_2
AAA_5
Mg_chelatase
Xre-like-HTH
HTH_30
HTH_7
HTH_17
HTH_1
HTH_psq
Phage_CP76
HTH_22
Motif
Other DBs
NCBI-ProteinID:
ALL66828
UniProt:
A0A0P0REJ9
LinkDB
All DBs
Position
2:complement(694568..696586)
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AA seq
672 aa
AA seq
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MARRHQLGSMLGLGDQAAMRGIVADAQRASLRHSDRGTMLAWERFLAGEPSTSAPPALLD
SWQRSLRSGVSPTAVSAPIAVYGDEAAALLWRHRDLLAAADRLFTVTADLFADSHSILLL
TNQDGVILKAAGDLRIQAAGEKIHLTIGGDWGEGSAGTNGIGTALATRQPTYIHASEHFC
EGIKSWSCAAAPICEPGTGAVIGVLDISGPPSTYQINNLTLAVTAARQIEMVLAEQAARE
HMRLLAFCLQRMSSSDATGMVAIDRSGRLVHSTGRVNLPVGIGERFPGMSESSAVEDWAQ
HLPAGLNADWFNPVVVDGDTIGAMLVVPARSRPLNVRVAVGHGEADPQRNCFAQIQGQSA
AMQAAVNRGRQLASRRVPVLIEGETGVGKELFARAIHGEDGEGGTFVAYNCGAASRELIA
SELFGHVRGAFTGATSEGRPGRFELAHGGTLCLDEIGEMPLDLQPVLLRVLEEGVIYRLG
DTQPRRVDVRLLTMTNRNLREEVETGRFRRDLYYRISVTRLRIPPLRERDIDIDLLVEHF
NRKLALRHGVPERKFSAEIMALLRAYSWPGNVREMRNVIENMLLTSSESAVSLDDLPSEL
LDGISVSGLTDPPLDDGSSLEATERLAIARAVHNTHGNLAQAARALGVSRSTLYRKIELY
QLEGVVKPAGKD
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaggagacatcagcttggcagcatgttgggtctaggtgatcaggctgcgatgcgt
ggcatcgtggccgatgcgcagcgtgccagcctccgtcattccgaccggggtacgatgctc
gcgtgggagcgttttctggcgggcgagccgtcgacctccgctcccccggcgcttcttgac
tcatggcaacgcagtttgcgatccggcgtgagtccgactgccgtttcggcacccatcgcg
gtatatggcgacgaagcggcggcgctgctctggcgccatcgggatttgctggcagcagca
gaccgcctgttcacggtgaccgcagatctttttgctgattcacattcaatcctgctgctg
accaatcaggacggcgttatccttaaagcggccggcgatctacgcatacaggcggcaggc
gaaaaaatccatttgacgattggcggtgattggggcgagggcagtgcgggtaccaacggt
ataggcaccgcgctggcaacccgccagccaacctatattcatgcgtcggagcatttctgc
gaaggcatcaagtcatggagttgtgcggcagcgccgatttgcgagcccggcaccggcgcg
gtgatcggtgtactcgatatatccggaccgccttccacctatcagatcaataacctgacg
ttggccgtgaccgccgcgcggcagatcgaaatggtgctcgccgagcaggctgcgcgcgag
catatgcgtttgttggccttctgcctgcagcggatgtcgtcgtccgatgcaaccgggatg
gttgccatcgaccgcagtggccggctcgtgcactccacaggcagagtcaatttgccggtc
ggtatcggcgagcgcttcccggggatgagcgagagctccgcggtggaagactgggcgcag
catttgccagcaggtttgaacgctgattggttcaacccggtcgtcgttgacggcgacacc
attggggcgatgctggtcgtgcccgcccgaagccgtcccctcaacgtgcgggtcgctgta
ggacacggagaggctgatccgcagcgcaactgcttcgcgcaaattcaggggcaaagtgct
gcgatgcaggccgccgtcaatcgcgggcgtcagctggccagcaggcgcgtaccggtgctg
atcgaaggcgaaacaggggttggcaaggaactctttgcgcgcgctattcacggtgaagac
ggcgaaggtggcaccttcgtcgcgtataactgcggggcggcttcgagagaactgattgcc
agtgagttgttcggtcatgtgcgtggcgcattcaccggcgcgacatcggaaggacgtcct
ggccggttcgagctcgcccacggtgggacgctctgtctcgacgagatcggtgagatgccg
ctcgatcttcaacccgttctattgcgggtgctggaagagggtgtcatctatcggcttggc
gacacgcagccgcgccgcgtcgatgtgcgtcttttaacgatgaccaatcgtaatctgcga
gaagaggtcgagacgggtcgctttcgccgggatctttattaccggatcagtgtgacacgg
ttgcgtattccgccgctgcgcgaacgggacattgatatcgatctgctggtcgagcacttc
aaccggaagcttgccctgcgtcacggcgtgcccgaacgaaaattcagcgcggagatcatg
gcgctgctgcgggcctattcgtggcccggcaatgtcagggaaatgcgcaacgtgatcgag
aatatgcttctgacgtcgagcgaatctgccgtgtcgctcgatgatttaccgtccgaattg
ctcgatggaatctcggtgtccgggttgacagatccgccgctggacgatggatcaagtctt
gaggcaactgaacgtctcgccattgcacgggccgtgcacaatacgcacggtaaccttgcg
caagccgcgcgcgccctcggcgtctcgcgcagcacactctatcgcaagatcgaactgtat
cagctggaaggtgtcgtcaaaccggcgggcaaggattga
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