Paraburkholderia caribensis: K788_0003303
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Entry
K788_0003303 CDS
T04141
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bcai
Paraburkholderia caribensis
Pathway
bcai03030
DNA replication
bcai03430
Mismatch repair
bcai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K788_0003303
03430 Mismatch repair
K788_0003303
03440 Homologous recombination
K788_0003303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcai03032
]
K788_0003303
03400 DNA repair and recombination proteins [BR:
bcai03400
]
K788_0003303
Enzymes [BR:
bcai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K788_0003303
DNA replication proteins [BR:
bcai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K788_0003303
DNA repair and recombination proteins [BR:
bcai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K788_0003303
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Cho_C
GIY-YIG_UvrC
GIY-YIG
Rv2179c-like
ATP-synt_DE_N
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ALL66113
UniProt:
A0A0P0RCC3
LinkDB
All DBs
Position
1:complement(3524021..3525199)
Genome browser
AA seq
392 aa
AA seq
DB search
MSELLLSETALDVPIVFVDLETTGGSVGAHRITEIGVVELGPDGASTWTTLVDPGQPIPP
FIQQLTGITDAMVRGAPTFESIAADLFARLDGKLFIAHNANFDRGFLRSEFQRAGFAFNP
DMLCTVRLSRALFPAEKRHGLDALVERHALVPSDRHRALADADLLWQFWQRLHGLVPVDV
LRAQIDKTMRRFRLAGDITEDLLDTAPAGCGVYAFFGENDAPLYVGRSVRVRQRLRAHLT
GERRSSKELKLAQQVRRVEWRGTGGEIGALLAEAQMIAALRPPHNRVPRVSRADPVDAPW
PYDGAIAFEERDAADGARVFHVVDKWRYLGHAPSLAEASTLLAASVVGAFELPTWRVLQS
HLARGLSVLPLSRPAAEPVASLIPAAAPADAA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaactgcttctttctgagacggccctcgatgtgccgatcgtttttgtcgacctg
gaaacgacgggtggttccgtcggcgctcatcggatcacggaaatcggcgttgtcgaactg
gggccggatggcgcgtccacctggaccacgctcgtcgaccctggccagccaatcccgcct
ttcatccagcagttgacgggcatcaccgacgcgatggtgcgcggcgcgcccaccttcgag
tcaatcgccgccgatcttttcgcgcggctcgacggcaagctcttcatcgcgcacaacgcg
aatttcgaccgcggttttttgcgcagcgagttccagcgcgcgggcttcgcgttcaatccc
gacatgttgtgcaccgtacgtctgtcgcgcgcgctttttccagccgaaaagcgtcacggc
ctcgatgcgctcgtggaacggcatgcgctcgtgccgtcggaccggcaccgcgcgctcgcc
gacgccgatctgctctggcagttctggcagcggctgcacggcctcgttcccgtcgacgtg
ctgcgcgcgcaaatcgacaagaccatgcgccggttccggctcgcgggcgatatcacggaa
gatctgctcgataccgcgcccgccggttgcggcgtctacgcgttctttggcgagaacgac
gcgccgctatacgtcggacgaagtgtgcgtgtgcgccagcgtctgcgcgcgcatctgacg
ggcgagcgccgttcgtcgaaagaattgaagcttgcgcagcaggtgcgccgcgtcgagtgg
cgcggcacgggcggggaaatcggcgcgctgcttgccgaagcgcaaatgatcgcggcgctc
cgtccgccacataaccgcgtgccgcgcgtgagccgcgctgatcccgtcgacgccccctgg
ccttacgacggcgcgatcgcgttcgaggagcgggatgcggccgatggcgcgcgcgtgttc
catgtggtggataaatggcgctatctcggacacgcaccctcgctggccgaggcatcgacg
ctgcttgccgcgagcgtcgttggcgcgttcgaactgccgacgtggcgcgttttgcagtcg
catcttgcgcgcggcctgagtgttttgccgctcagccgtccggccgccgagcccgttgca
agcttgatccccgcggcggcacccgccgacgctgcctag
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