Paraburkholderia caribensis: K788_0003506
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Entry
K788_0003506 CDS
T04141
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
bcai
Paraburkholderia caribensis
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcai03009
]
K788_0003506
Enzymes [BR:
bcai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
K788_0003506
Ribosome biogenesis [BR:
bcai03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
K788_0003506
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
FtsJ
Motif
Other DBs
NCBI-ProteinID:
ALL63455
LinkDB
All DBs
Position
1:complement(738332..739753)
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AA seq
473 aa
AA seq
DB search
MTRKPFKPASPQRSRDSRLPALHLAPESLGFALDCAAQAVGAVRQGAALPAALQAIFTSL
PEGVATASRGAVQDIAYRTMRRLGTAEWLVAKLVRKAPPPHIAHVLACALALLVDEESNA
AYAPFTVVDQAVDAIGARREFAFAKGLVNAVLRNFLREREALLADARNDAVAHWNYPVWW
IDAVRNAWPDTWQEMLAAGNSQGPLTLRVNARRSTVDAYLRTLREHQIAATQAGDHAVRL
DTPMPVDRIPGFSEGVVSVQDAGAQLAAQWLGVRDGMRVLDACAAPGGKTGHLLELANLD
LIALESDAPRARRIGENLQRLGLHAHVRVGDAGNPAQWHDAADLPFDRILADVPCSASGI
VRRHPDIRWLRRASDIPALVEEQRRILEALWPLVKTGGELLYVTCSIFPEEGELQAQWFG
NRHADAVRLDAPGQLLPAVARAPADVSAGSRAGQSTGSSLDHDGFFYARFQKR
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaaagcctttcaagcctgcatcgccgcagcgttcgcgcgactcccgtctgccg
gcgctgcatctcgcgcccgaatccctcggcttcgcgctcgactgcgcggcccaagccgtt
ggcgcggttcggcagggcgcggcgttgccggccgcgttgcaggcgatcttcacgtcgttg
ccagagggtgtcgcgacggcatcgcgtggggccgtgcaggacatcgcataccggacgatg
cgccggctcggcacagccgagtggctggtcgcgaaactcgtgcgcaaggcaccgccgccg
catatcgcgcatgtgctcgcgtgtgcgctcgcattgctggtcgatgaagagagcaatgca
gcctatgcgccgttcacggtcgtcgatcaggccgtggacgcgattggcgcgcggcgcgag
ttcgcgtttgcgaagggactggttaacgccgtgctgcgcaacttcttgcgcgagcgcgaa
gcgttgctggccgatgcgcggaacgatgccgtcgctcactggaattaccctgtctggtgg
atcgacgccgtacgcaacgcatggcccgatacatggcaggagatgctcgccgcgggcaac
agccagggtccgctgacgctgcgtgtgaacgcgcgccgctccactgtcgatgcatacctc
cggacgttgcgcgagcatcagattgccgcgacgcaggcgggcgaccatgccgtgcgtctc
gacacgccaatgcccgtcgaccgcattcccggtttcagcgaaggcgtcgtctcggtgcag
gacgcaggcgcgcaactcgccgcgcagtggctcggcgtgcgcgacggcatgcgcgtgctg
gatgcctgtgcggcgcccggcggcaagacgggacatctgctcgaactggccaacctcgat
ctgatcgcgctcgaaagcgacgcgccgcgcgcgcgacgcatcggcgaaaacctgcagcgt
ttgggtctgcacgcgcatgtgcgggttggcgatgcaggcaatccggcgcaatggcacgac
gccgccgatctgcccttcgatcgcattctcgctgacgtgccctgctcggcatcgggcatc
gtgcgccggcatccggacattcgctggctgcgccgcgcgtcggacattcccgcgctcgtc
gaagaacagcgccgcattctcgaagcgctgtggccgctcgtcaaaacgggtggcgagttg
ctgtacgttacctgctcgatctttcccgaagaaggcgagttgcaggctcagtggtttgga
aaccggcacgcggatgcggtacgattggacgcgccggggcaactgctccctgcagtcgcc
cgcgcgcccgccgacgtatcggctggttcccgcgccggacaaagcactggttcgagctta
gaccacgacggattcttctacgcgcgctttcagaaacggtga
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