Paraburkholderia caribensis: K788_0003540
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Entry
K788_0003540 CDS
T04141
Name
(GenBank) DNA polymerase III beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
bcai
Paraburkholderia caribensis
Pathway
bcai03030
DNA replication
bcai03430
Mismatch repair
bcai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K788_0003540
03430 Mismatch repair
K788_0003540
03440 Homologous recombination
K788_0003540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcai03032
]
K788_0003540
03400 DNA repair and recombination proteins [BR:
bcai03400
]
K788_0003540
Enzymes [BR:
bcai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K788_0003540
DNA replication proteins [BR:
bcai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K788_0003540
DNA repair and recombination proteins [BR:
bcai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K788_0003540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
ALL63488
LinkDB
All DBs
Position
1:complement(773694..774797)
Genome browser
AA seq
367 aa
AA seq
DB search
MQLVKTERDNLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADF
GVGGDSVATTVAARKLLDILRAMPDGQVTLTLNDKRLTVQSGKSRFALQTLAADEFPTVA
QAKDFGANLAVPQKTFRQLLGMVHFAMAQQDIRYYLNGMLLVVDGDQLMAVATDGHRLAF
SSMKIEGSFARQEVIIPRKTILELQRLLEDIDDVLKIDIAPTQVKFTFGGVELVSKLVEG
KFPDFQRVIPKSHKNTFVIGREELQRSLQRAAILTSDKFKGVRCIVEPGQLKIMSTNADQ
EEAQEELEIPYQGDSIDIGFNVTYLLDVLANLKVDLLEISLGDASSSALITIPENDEFKY
VVMPMRI
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggtcaagaccgaacgcgataacctcctcaggccgctgcaaaccgtgagcggc
attgtcgaacgccgtcatacgttgccgatcctcgccaatttgctgattaccaagaacggc
ccggacgtctcgttcctgtccaccgacctcgaactgcaaatcaccacgcgcgccgacttc
ggtgtcggcggtgactcggtggccacaacggtggcggcacgcaagctgctcgacattctg
cgcgcgatgcccgacgggcaagtcacgctgaccctgaacgacaaacgcctgaccgtccag
tccggcaaaagccgtttcgccttgcagacgctggcggccgacgagttcccgaccgtcgct
caagctaaagacttcggcgcgaacctagcggttccccaaaaaacattccgccagctcctc
ggcatggtccacttcgcgatggcgcagcaggacatccgttactacctgaacggcatgctg
ctggtggtcgatggcgaccaattgatggccgtcgcgacggacggtcaccgcctcgcgttt
tcgtcgatgaagatcgaaggctcgttcgcccgccaggaagtcatcatcccgcgtaagacg
attctcgaactgcagcgtctgctcgaagacatcgacgacgtcctcaagatcgacatcgcg
cccacgcaggtcaagttcacgttcggcggcgtcgagctggtgtcgaagctggtcgaaggc
aagttccccgacttccagcgcgtgattccgaagtcgcacaagaacaccttcgtgatcggc
cgcgaagagctgcaacgttcgctgcaacgtgcggccattctcacgtcggacaagttcaag
ggcgtgcgctgcatcgtcgagccgggccagttgaagatcatgtccaccaacgccgaccag
gaagaggcgcaggaagaactcgaaatcccctaccagggcgacagcatcgacatcggtttc
aacgtcacgtacctgctcgacgtgctcgcgaacctgaaggtcgacctgctggaaatcagc
ctcggcgacgcgagttcgagcgcgctgatcacgattcccgagaacgacgagttcaaatac
gtggtgatgccgatgcgcatctga
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