Paraburkholderia caribensis: K788_00043210
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Entry
K788_00043210 CDS
T04141
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
bcai
Paraburkholderia caribensis
Pathway
bcai02020
Two-component system
bcai02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K788_00043210
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K788_00043210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcai03021
]
K788_00043210
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bcai02035
]
K788_00043210
Transcription machinery [BR:
bcai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K788_00043210
Bacterial motility proteins [BR:
bcai02035
]
Flagellar system
Flagellar assembly proteins
Stator
K788_00043210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
CDT1_C
UPF0122
Motif
Other DBs
NCBI-ProteinID:
ALL63652
UniProt:
A0A0P0R5W7
LinkDB
All DBs
Position
1:947824..948558
Genome browser
AA seq
244 aa
AA seq
DB search
MYNAQGKISQAEVLTKYAPLVRRLGLQLVAKMPASVDLDDLIQAGMIGLLDAASRYKEDQ
GAQFETYASQRIRGAMLDELRSNDWLPRSLRRTSREVESAVHQVEQSLGRSASETEIAEH
LKMPLDEYQSMLQDLHGSQLIYYEDFDRSADDEPFLDRYCVDHSDPLSALLDESLRGALV
EAIDRLPEREKLLMSLYYERGLNLREIGAVMEVSESRVCQLHSQAVARLRTRLREQAWAS
AETS
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacgctcaaggaaaaatttcgcaagccgaggttctgacgaagtacgcaccgctg
gtgcgccgtctcggcttgcagctcgtggcgaagatgccggcgagcgtggatctcgacgat
ctgattcaggcgggcatgattggtctgctggacgcggcgagccgctacaaggaagaccag
ggcgcgcagttcgagacatacgcgagccagcggattcgcggcgcgatgctcgacgagttg
cgcagtaatgactggttgccgcggagtttgcggcgcacgtcgcgcgaggtggagtcggcc
gtgcatcaggttgagcagtcgctggggcgctcggcgagcgagaccgagattgctgagcat
ctgaagatgccgctcgatgagtatcagtcgatgttgcaggatctgcatggcagtcagctg
atctattacgaagactttgatcgttcggccgatgatgagccgtttcttgaccggtattgc
gtcgatcattccgatccgttgtcggcattgctcgatgagtctttgcgtggcgctttggtt
gaggcgattgaccggttgcccgagcgggagaagctcttgatgtcgctgtattacgagcgt
gggttgaatttgcgtgagatcggggcggtgatggaggtcagcgaatcgcgggtttgccaa
ttgcattcgcaggccgttgcaaggcttaggactcgcttgcgcgagcaggcttgggcttct
gctgaaactagctga
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integrated database retrieval system
