KEGG   Paraburkholderia caribensis: K788_0004430
Entry
K788_0004430      CDS       T04141                                 
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
bcai  Paraburkholderia caribensis
Brite
KEGG Orthology (KO) [BR:bcai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bcai03032]
    K788_0004430
   03036 Chromosome and associated proteins [BR:bcai03036]
    K788_0004430
   03400 DNA repair and recombination proteins [BR:bcai03400]
    K788_0004430
DNA replication proteins [BR:bcai03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    K788_0004430
Chromosome and associated proteins [BR:bcai03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    K788_0004430
DNA repair and recombination proteins [BR:bcai03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      K788_0004430
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 UBA_HYPK HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: ALL65177
UniProt: A0A0P0RA28
LinkDB
Position
1:2532300..2532572
AA seq 90 aa
MNKTELIDHIAQQADISKAAAGRALDAVIGGVKGTLKKGGSVTLVGFGTFAVGKRTARTG
RNPRTGAAIKIKAAKVPKFRPGKALKDALN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaataaaacggaattgatcgatcacatcgcgcagcaagccgacatttcgaaagcggca
gcaggtcgcgcgttggatgccgtgatcggtggcgtcaaaggcacgttgaaaaaaggtggt
tcggtcacgctggtcggcttcggcacgttcgccgttggcaagcgcacggcacgcacgggt
cgcaatccgcgcacgggcgcagcaatcaagatcaaggcagccaaggttcctaaatttagg
cctggcaaagctctgaaggatgcgttaaactaa

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