Paraburkholderia caribensis: K788_0004581
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Entry
K788_0004581 CDS
T04141
Name
(GenBank) hemin-binding outer membrane transmembrane protein associated with biofilm formation
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
bcai
Paraburkholderia caribensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_12
TPR_7
TPR_2
TPR_8
TPR_14
TPR_1
TPR_16
TPR_17
Leuk-A4-hydro_C
Motif
Other DBs
NCBI-ProteinID:
ALL65333
UniProt:
A0A0N7JU38
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All DBs
Position
1:complement(2693158..2695203)
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AA seq
681 aa
AA seq
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MKTKRSSRHKHAAVKATALLLVLLARDYCAAQPTTASESTGNVAAGHVAEGQVDTERDQL
RKRIFAEAGAGAAQLALQEARASRDAFSDHDLFQIEALVVETEVHWGRQQSLASDEPDRL
AQSNTALAHIDEMLARMPASDEFADVRRSVLVEKVAALQGVGRMKEATALYEDLSRSNQP
MPARTYAAAGDAYTYLDRPRKAAPAYERALQTPVEPLVPSVEPHALKRIDVQEGLFFAYL
DSGRYDNAQQLLKEISASTPIRADLAEHPEDVNEDYGRVKKLQAQYLLYTDRTREGVAAL
DALRHEAPFDPALISARSDASLVQQRPHEAQKVYEGTLVDHPGDIETLAGLGRTSLELGQ
YDRAADVNATFSDRFPDNNTVKTFQQDYAAYKSPQLIVAGNGQKGNSVLADENWGIDTQL
YSMPLAEYWRVFAHQFSGRANTGDGNSVSRIRNGIGADFRFHGIDAAAEVNRSTGGQAKT
GGAGSVSYAPDDRWRFSAGVDSNVNTLPWKAYQAGVTGRAATGGVRYSIDDYRYFDLTYG
ATRYSDTNLNQAWVGTWYERLINTPSHLVATWVELNTSSNTLANTAYFAPHRDMTAQLTA
MYQWTSWRNADQSLANRAYATVGGYRQTDIGNSMLWEVRLEQQWQFNAHASLAYGLGLSS
QRLDHTRETSKLIYLNLNIPL
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgaaacgctctagccgacacaagcacgctgcagtcaaggcgaccgccttgctg
ctggtgctgcttgcgcgcgactactgcgccgcgcagccgaccactgcgtccgaaagcacg
gggaacgtcgcagcagggcatgtcgcagaaggccaggtagacacggagcgcgaccagctc
cgcaaacgcattttcgcggaagcaggcgcgggcgccgcgcagcttgcgctccaggaagcg
cgtgcgagccgcgacgcgttctccgatcacgacctgttccagatcgaagcgctcgtcgtc
gaaacggaggtgcattggggcaggcaacagtcgcttgcatccgatgaacccgaccggctc
gcgcagtcgaacacggcgctcgcgcacatcgacgagatgctggcgcgcatgccggcatcg
gatgaattcgcggacgtgcgccgttcggtgctcgtcgaaaaagtcgcggccttgcaaggc
gtgggccgcatgaaagaggcgacggcgctctacgaagacctgtcgcgctcgaaccagccg
atgcccgcgcgcacctatgcggcagcaggcgatgcgtacacctacctcgatcggccgcgc
aaggctgcgccggcttacgagcgtgcgctgcagacgcccgtcgagccgctcgtgccgtct
gtcgagccgcatgcattgaagcgcatcgacgtgcaggaggggctctttttcgcgtacctc
gattcgggccgctacgacaacgcgcagcaactgctcaaggagatttccgccagcacgccg
attcgcgcggatctcgccgaacatccggaagacgtcaacgaagactatggccgcgtgaag
aagctgcaggcgcagtacctgctctacacggaccgcacccgcgaaggcgtcgcggcgctc
gacgcgttgcgtcacgaagcgccgttcgatcccgcgctgatcagcgcgcgctcggatgcg
tcgctcgtccagcagcgtccgcacgaggcgcagaaggtctacgaaggcacgctggtcgat
caccccggcgatatcgaaacgctcgcgggtctcggccgcacctcgctcgagctgggtcag
tacgatcgcgcagccgatgtcaacgcgaccttcagcgaccgctttcccgacaacaacacg
gtcaagacgttccagcaggattacgcggcatacaagagcccgcagctgatcgtcgcgggc
aacgggcagaagggcaactcggtcctcgccgacgagaactggggcatcgacacacagctc
tactcgatgccgctcgccgagtattggcgcgtgttcgcgcatcagttcagcggccgcgcg
aacacgggcgacggcaacagcgtgagccgcatccgcaacggcatcggcgcggacttccgc
tttcatggcatcgacgccgcagccgaagtcaaccgttcgacgggcggccaggcaaaaacg
ggcggcgcaggcagcgtgagctacgcgcccgacgaccgctggcgcttttcggcgggtgtc
gacagcaacgtcaacacgctgccgtggaaagcttaccaggcgggcgtcacgggccgcgcc
gcaacgggtggcgtgcgctacagcatcgacgattaccgctatttcgacctcacatacggc
gcgacgcgctatagcgacacgaacctgaaccaggcgtgggtcggcacgtggtacgagcgt
ctcatcaacacgccgagccacctggttgcgacgtgggtggagctgaacacgagcagcaac
acgctcgccaacaccgcgtacttcgcaccgcatcgcgacatgacggcgcaactcacggcg
atgtaccagtggacctcgtggcgcaacgcggaccagtcgctcgcgaaccgcgcgtacgcg
acggtcggcggctaccggcaaacggatatcggcaacagcatgctgtgggaagtgcgtctc
gaacagcaatggcagttcaacgcgcacgcatcgcttgcgtatggcctcggtctttccagc
cagcgcctcgatcacacgcgcgagaccagcaagctcatctacctgaacctgaacattcct
ctgtag
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integrated database retrieval system
