Paraburkholderia caribensis: K788_0005362
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Entry
K788_0005362 CDS
T04141
Name
(GenBank) Selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
bcai
Paraburkholderia caribensis
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
bcai03012
]
K788_0005362
Translation factors [BR:
bcai03012
]
Eukaryotic type
Elongation factors
K788_0005362
Prokaryotic type
K788_0005362
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
Beta-barrel_SelB
WHD_2nd_SelB
WHD_3rd_SelB
GTP_EFTU_D2
WHD_2nd_SelB_bact
MMR_HSR1
DUF5817_CT
SRPRB
TrmB
GTP_EFTU_D4
Motif
Other DBs
NCBI-ProteinID:
ALL67478
LinkDB
All DBs
Position
2:complement(1333829..1335769)
Genome browser
AA seq
646 aa
AA seq
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MIVGTAGHIDHGKTTLVRALTGVDTDRLKEEKARGISIELGYAYTPLDNGDVLGMIDVPG
HEKLVHTMAAGACGIDYALLVIAADDGIMPQTREHLAILQLLGVTRGAIALTKTDRVDAA
RIAQVHDEIRAWLAATPFADAPVFDTNATLSGDTGVRALSCHLRDVAVAWRARRDDGLFR
LAVDRVFTLAGQGTIVTGTVFAGRVATGDTLMLEPAHHAVRVRSIHAQNRAADVGRAGQR
CALNLAGIDKDAIARGDWIVDGRLAKPGERFDVELTLLADADITLQHWAPLHVHIGTLHR
VAHVALLEGDRLAAGCSARVQLVFDVPVCALPGDRFIVRNAQATRTVGGGRVLDPFGPPR
KRRTAERRAWLDALQAWLDEGRIGPLLEEAPRGVTRSMLTQLTGLPADSLPLPTDADEIA
LHGKDAGDAVVVLRTHWARLRSNVIAALDQYHERSPDELGPDAARLRRIAAPLVPDAMWR
ALVDSLVAAGVVARSGPWLHSPGHSIALDSNEQSLADSLLPLLLEGRFDPPWVRDLAKTT
GRDEGAVRQVLRKLARQGDVHQVVRDLFYHRDVVHELARLVAGIANGHGGALGASGFRDA
TGLGRKRAIQILEFFDRIGYTRFQRDVHWLRPDSQLHEAIVCEAGA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgggacggcgggccatatcgaccacggcaagacgacgctggtgcgcgcgctg
acgggcgtcgacaccgaccgcctgaaggaagagaaggcgcgcggcatttcgatcgaactc
ggctacgcctacacaccgctcgacaacggcgacgtgctcggcatgatcgacgtgccgggc
cacgaaaagctcgtgcatacgatggccgcgggcgcgtgcggcatcgactatgcgctgctc
gtgatcgccgccgacgacggcatcatgccgcagacgcgcgagcatctcgcgatcctgcaa
ctgcttggcgtcacgcgcggcgcgatcgctctgaccaagaccgatcgcgtggatgccgcc
cgcatcgcgcaggtgcacgacgagattcgcgcgtggctcgcggcgacgccgttcgccgat
gcgcccgtcttcgacacgaacgcgaccttatccggcgataccggcgtgcgcgcgctgtcg
tgtcacctgcgcgacgtcgccgttgcatggcgcgcgcggcgcgacgacggactgtttcgt
ctcgccgtcgaccgtgtgttcacgcttgccgggcagggcacgatcgtgacgggcacggtg
ttcgccgggcgcgtcgcgacgggcgacacgttgatgctcgaaccggcgcatcatgccgtg
cgcgtgcgcagcatccatgcgcaaaaccgcgcggccgatgtcggacgcgcggggcagcgc
tgcgcgctcaatctcgccggcatcgataaagatgcgattgcgcgcggcgactggatcgtc
gacgggcggcttgcgaaaccaggtgagcgcttcgacgtcgagctgacgctgctcgcggac
gcggacatcacgttgcaacactgggcgccgctgcatgtgcatatcggcaccctgcatcgt
gtcgcgcatgtggcgctgctcgaaggcgacaggctcgcggccggttgcagcgcacgcgtg
caactggtgttcgatgtgcccgtctgcgcgttgccgggcgatcgcttcatcgtgcgcaat
gcgcaggcgacgcgcacggtcggcggcgggcgcgtgctcgatccatttggcccgccgcgc
aagcgcaggacggcggaacggcgcgcgtggctcgatgcgttgcaggcgtggctcgacgaa
ggccgcatcggtccgctgctcgaagaggcgccgcgcggcgtcacacgttcgatgctgacg
caactgacggggctgcccgccgactcgctgccgctgcccaccgatgccgacgagattgcg
ctgcacggcaaggacgcgggcgatgccgtcgtcgtgctgcgtacgcactgggcgcgtctg
cgatcgaacgtgatcgcggcgctcgatcaatatcacgagcgctcgcccgacgaactggga
ccggatgccgcgcgcttgcggcgcatcgcggcgccgctggtgcccgacgcgatgtggcgc
gcgctggtcgactcgctcgtggctgcaggtgttgtcgcgagaagcgggccgtggctgcat
tcaccaggtcattcgattgcgctcgattcgaacgagcaaagtctcgccgacagcttgctg
ccgctgcttctggaaggccgcttcgatccgccatgggtgcgcgatctcgcgaagacgacg
gggcgggacgaaggtgccgtgcgtcaggtgttgcgcaagctcgcgaggcaaggcgacgtg
catcaggtcgttcgcgatctgttctatcaccgcgacgtggtgcatgagcttgcgcggctg
gttgccgggattgcgaatgggcatggcggcgcgctgggcgcatcggggtttcgcgacgcg
acagggctgggacgcaagcgcgcgatacagattctggaattcttcgatcgcatcggctat
acgcgctttcaacgcgacgtgcactggttgaggccggattcgcagttgcacgaggcaatt
gtgtgcgaagcgggtgcgtga
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