Paraburkholderia caribensis: K788_0005412
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Entry
K788_0005412 CDS
T04141
Name
(GenBank) Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
bcai
Paraburkholderia caribensis
Pathway
bcai02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K788_0005412
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bcai02000
]
K788_0005412
Transporters [BR:
bcai02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
K788_0005412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Seadorna_VP6
Motif
Other DBs
NCBI-ProteinID:
ALL67423
UniProt:
A0A0P0RG14
LinkDB
All DBs
Position
2:complement(1280202..1281899)
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AA seq
565 aa
AA seq
DB search
MIHDASTRTRAFDLKKTAFASLGTLAASALLAMSGCSKSDADTTTQRAQSLKPAAGGTLT
WGVTTEPACFDPHRASQQNAFWVIRNYIDSLISKKTDGTYAPWLAKSWSVADDGKSYTFN
LRDDVHFTDGTPFDANAVKANFDYILKNVSTTSASASLLVHFDHVEVVSPYVARLVMKQP
DSTTLESLSSVKLGFISPKALAENKDLCGGGPGIVGTGPFVFSAYQRGQSATFTRNADYK
WAPGNAQHQGQAWLEQVTYRFLPEAAVRTGALSSGQVDLIEGVQPTDAAVFDKVDGFQYL
TGPSATTSFTLNINYTVAPASDVNVRRALRDGFDLDAIVKSVYLGTVQRAWSNIGPDNPD
YNADLRHSWGNDIKRANRLLDEAGWTTRDSEGFRTKDGKRLSIEVGYPQPYVRDSRDVLI
RAIQSALRQNIGLDLGLRITTAGDFANQKATGNWTIYPNTDNPSDVAMELWDMLGDQGFL
YNAIKTPDASIVDSINRARLLPIGDERRKLLAFVQKRAVDEAFIVPLFAPAYHLAAKSTV
HGVGFEPQLDGPASAYDIWVDRQGG
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgattcacgacgcttctacccgcacacgcgcattcgacctgaagaaaaccgctttcgcc
tcactcggcaccctggccgcgagcgctttgctcgcaatgagcggctgcagcaaatcggac
gccgacacgacaacacaacgcgcgcaatcattgaagcctgccgcgggcggcacgctgaca
tggggcgtgacaaccgagccggcgtgtttcgatccacaccgcgcgtcacagcagaacgcc
ttctgggtcatccgcaactacatcgattcgctgatcagcaagaagacggacggcacctac
gcgccctggctcgcgaaatcgtggagcgtggccgacgacggcaagagctacacgttcaac
ttgcgcgacgacgtgcatttcaccgacggcacgccgttcgacgcgaacgctgtgaaagcc
aacttcgattacatcctgaagaacgtcagtacgacctcggcatcggcttcattgctggtg
cacttcgatcatgtcgaggtggtgtcgccgtatgtcgcgcgtctggtgatgaaacagccg
gattccaccaccctggaatcgctgtcgagcgtgaagctcggcttcatctcgcccaaggcg
ctcgcggaaaacaaggatctgtgcggcggcggccccggcatcgtgggcaccgggccgttc
gtgttcagtgcctaccagcgcggacaatcggcgaccttcacccgcaatgccgactacaaa
tgggcgccggggaacgcgcaacatcaagggcaagcctggctcgaacaggtgacctaccgc
tttctccccgaggcggcggtgcgcacgggcgcgctcagttcgggtcaggtcgatctgatc
gaaggcgtgcagccgacggacgccgccgtattcgacaaggtggatggcttccagtacctg
acgggtccgtccgcgacgacctccttcacgctgaacatcaactacacggtcgcgcccgcg
agcgatgtcaacgtgcgtcgtgcgctgcgcgatggcttcgatctcgatgcgatcgtcaag
agcgtctatctcggcacggtgcagcgcgcatggtcgaacatcgggcccgacaatcccgac
tacaacgctgacctcaggcattcgtggggcaacgacatcaagcgggccaaccgtctgctg
gacgaagcggggtggacgacgcgcgacagcgagggctttcgcacgaaggacggcaagcgg
ctgtcgatcgaagtcggctacccgcagccctatgtgcgcgatagccgcgacgtgctgatc
cgcgccatccagtcggcgctgcggcaaaacatcggcctcgatctcgggctgcgcatcacc
acggcgggcgacttcgcgaaccagaaggcgacgggcaactggaccatctacccgaacacc
gacaatccgtcggatgtcgcgatggaactgtgggacatgctcggcgaccagggcttcctc
tacaacgcgatcaagacaccagacgcgagcattgtcgactcgatcaaccgggcgcggctg
ttgcccatcggcgacgagcggcgcaagctgctcgcgttcgtgcagaagcgcgccgtcgac
gaagcgttcatcgtgccgctgttcgcgcccgcctaccatctcgcggcgaaatcgacggtc
cacggcgtgggcttcgagccgcaactcgacggaccggcgagtgcgtacgacatctgggtc
gacaggcagggaggctga
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