Paraburkholderia caribensis: K788_0005558
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Entry
K788_0005558 CDS
T04141
Name
(GenBank) DNA replication and repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
bcai
Paraburkholderia caribensis
Pathway
bcai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K788_0005558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcai03400
]
K788_0005558
DNA repair and recombination proteins [BR:
bcai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K788_0005558
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
K788_0005558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
ALL65928
UniProt:
A0A0P0RC97
LinkDB
All DBs
Position
1:complement(3331728..3332687)
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AA seq
319 aa
AA seq
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MTPPNNTHPDADPEDASAHGEQPASFAPPPRAKPARPARSTKRSAPRQDGDDFGEGGDHA
EAALRKTSARRSTSRVPRAPASDFRISEQPAFVLHSYPYRETSLIVDVLSRDHGRVALVA
KGAKRPHSALRGVLQTFQPLSLAWSGKSEMRTLTGAEWVGGMLPLAGDALLCGFYVNELL
VKFLAREDPHPQLFHHYVVTLTRLAHDEPPVQVLRSFERVLLRETGYAMSLNRTVARKAV
VSEGRYVFDPERGVREASSEYPSNWPVISGQTLLDMEQDDYHRAQTVAQSKTLMRFLLNT
YLGGAPLATRQILIDLQNL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgccgaacaacactcaccccgacgccgatcccgaggacgcctccgctcacggc
gagcagccggcctcgttcgcgccgccgccacgcgccaagccggcgcgccccgcacgttcg
acgaaacgcagcgcgccgcgtcaggacggcgatgacttcggcgaaggcggcgatcacgcc
gaagccgcgctgcgcaagacatccgcgcgtcgttcgacgtcgcgtgtgccgcgtgcgcca
gcttccgacttccgtatctccgagcagcccgcgttcgtgctgcatagctatccgtatcgc
gagacgagcctgatcgtcgacgtgttgtcgcgcgatcacggccgtgtggcgctcgtcgcg
aagggcgcgaagcgtccgcattccgcgctgcgcggcgtgctgcagaccttccagccgttg
tcgctcgcatggtccggcaagtcggaaatgcgcacgttgacgggcgccgagtgggtcggc
ggcatgttgccgctcgccggcgacgcgctgttgtgcggcttctacgtgaacgaattgctc
gtcaagtttctcgcgcgagaggatccgcacccgcaactctttcatcattacgtcgtcacg
ctgacgcgcctcgcgcacgatgagccgcccgtgcaggtgctgcgttcgttcgagcgcgtg
ctgctgcgcgaaaccggctacgcgatgtcgctcaaccgcacggtggcgcgcaaggccgtg
gtgtctgaaggccgctatgtgtttgatcccgagcgcggcgtacgcgaagcatccagcgag
tatccttcgaactggcccgtgatcagcgggcagaccttgctcgacatggagcaggacgat
taccatcgagcgcagaccgtcgcgcaaagcaagacgctgatgcgctttttgctcaacacc
tatctcggcggcgcgccgctcgcgacccgccagatcctgatcgacctgcagaatctatga
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